RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 PFKFB3Q16875 520 aaPredicted RBP4.44□□□□□ -1.7
CHD1-203ENST00000505657 TRIM60Q495X7 471 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 MTX3Q5HYI7 312 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 TMEM63BQ5T3F8 832 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 BHLHA9Q7RTU4 235 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 ASB12Q8WXK4 309 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 CELF1Q92879 486 aaKnown RBP4.44□□□□□ -1.7
CHD1-203ENST00000505657 GPR78Q96P69 363 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 FCRL5Q96RD9 977 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 RTKNQ9BST9 563 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 SEMA4CQ9C0C4 833 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 PRSS22Q9GZN4 317 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 ARL8BQ9NVJ2 186 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 TRPC5Q9UL62 973 aaPredicted RBP4.44□□□□□ -1.7
CHD1-203ENST00000505657 DAPP1Q9UN19 280 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 ZBTB1Q9Y2K1 713 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 COMMD10Q9Y6G5 202 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 SETD1BQ9UPS6 1966 aaKnown RBP4.44□□□□□ -1.7
CHD1-203ENST00000505657 SLC22A23A1A5C7 686 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 SLC38A8A6NNN8 435 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 E5RJQ4 531 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 DSCR3O14972 297 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 ACTL6BO94805 426 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 HOXD9P28356 352 aaPredicted RBP4.43□□□□□ -1.7
CHD1-203ENST00000505657 TACR3P29371 465 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 HOXA7P31268 230 aaPredicted RBP4.43□□□□□ -1.7
CHD1-203ENST00000505657 SLC8A1P32418 973 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 FOXL2P58012 376 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 TAS2R50P59544 299 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 DMWDQ09019 674 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 SF3A3Q12874 501 aaKnown RBP eCLIP4.43□□□□□ -1.7
CHD1-203ENST00000505657 OS9Q13438 667 aaPredicted RBP4.43□□□□□ -1.7
CHD1-203ENST00000505657 Q4G0T1 1027 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 PAPD7Q5XG87 772 aaKnown RBP4.43□□□□□ -1.7
CHD1-203ENST00000505657 ERAP2Q6P179 960 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 SLC44A2Q8IWA5 706 aaPredicted RBP4.43□□□□□ -1.7
CHD1-203ENST00000505657 C16orf71Q8IYS4 520 aaPredicted RBP4.43□□□□□ -1.7
CHD1-203ENST00000505657 ENAHQ8N8S7 591 aaPredicted RBP4.43□□□□□ -1.7
CHD1-203ENST00000505657 WIPF2Q8TF74 440 aaPredicted RBP4.43□□□□□ -1.7
CHD1-203ENST00000505657 WDR60Q8WVS4 1066 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 REXO5Q96IC2 774 aaKnown RBP4.43□□□□□ -1.7
CHD1-203ENST00000505657 ZNF845Q96IR2 970 aaPredicted RBP4.43□□□□□ -1.7
CHD1-203ENST00000505657 FAM118BQ9BPY3 351 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 SORBS1Q9BX66 1292 aaKnown RBP4.43□□□□□ -1.7
CHD1-203ENST00000505657 VPS16Q9H269 839 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 PABPC3Q9H361 631 aaKnown RBP4.43□□□□□ -1.7
CHD1-203ENST00000505657 CCDC134Q9H6E4 229 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 SEPSECSQ9HD40 501 aaKnown RBP4.43□□□□□ -1.7
CHD1-203ENST00000505657 PRDM8Q9NQV8 689 aa4.43□□□□□ -1.7
CHD1-203ENST00000505657 SIRT4Q9Y6E7 314 aaPredicted RBP4.43□□□□□ -1.7
CHD1-203ENST00000505657 CYP2D7A0A087X1C5 515 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.42□□□□□ -1.7
CHD1-203ENST00000505657 INPPL1O15357 1258 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 PLAUP00749 431 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 SLC3A2P08195 630 aaKnown RBP4.42□□□□□ -1.7
CHD1-203ENST00000505657 ITGA2BP08514 1039 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 CYP21A2P08686 494 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 RFPL3SP0C7P2 107 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 SOX2P48431 317 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 SLC37A1P57057 533 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 MTA1Q13330 715 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 CBFBQ13951 182 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 KRT72Q14CN4 511 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 JMJD6Q6NYC1 403 aaPredicted RBP4.42□□□□□ -1.7
CHD1-203ENST00000505657 RHPN2Q8IUC4 686 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 MYCT1Q8N699 235 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 CLEC4CQ8WTT0 213 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 HMGB4Q8WW32 186 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 P2RY11Q96G91 374 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 FAR2Q96K12 515 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 ZNF778Q96MU6 729 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 SENP7Q9BQF6 1050 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 HERC5Q9UII4 1024 aaKnown RBP4.42□□□□□ -1.7
CHD1-203ENST00000505657 SLC12A4Q9UP95 1085 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 ZNF804BA4D1E1 1349 aa4.42□□□□□ -1.7
CHD1-203ENST00000505657 C2CD4BA6NLJ0 364 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 TTC34A8MYJ7 566 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 IPO5O00410 1097 aaKnown RBP4.41□□□□□ -1.7
CHD1-203ENST00000505657 NBNO60934 754 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 HEXIM1O94992 359 aaKnown RBP4.41□□□□□ -1.7
CHD1-203ENST00000505657 SHC2P98077 582 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 RNASELQ05823 741 aaKnown RBP4.41□□□□□ -1.7
CHD1-203ENST00000505657 TIGD6Q17RP2 521 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 TTC22Q5TAA0 569 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 TANGO2Q6ICL3 276 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 WDR93Q6P2C0 686 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 KLHL17Q6TDP4 642 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 RBM44Q6ZP01 1051 aaKnown RBP4.41□□□□□ -1.7
CHD1-203ENST00000505657 RRAGAQ7L523 313 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 ADGRF3Q8IZF5 1079 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 EXD3Q8N9H8 876 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 PIGKQ92643 395 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 SCNM1Q9BWG6 230 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 SPRTNQ9H040 489 aaPredicted RBP4.41□□□□□ -1.7
CHD1-203ENST00000505657 TMEM184CQ9NVA4 438 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 ZNF70Q9UC06 446 aaPredicted RBP4.41□□□□□ -1.7
CHD1-203ENST00000505657 MAFFQ9ULX9 164 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 BTBD3Q9Y2F9 522 aa4.41□□□□□ -1.7
CHD1-203ENST00000505657 AGAP5A6NIR3 686 aa4.4□□□□□ -1.71
CHD1-203ENST00000505657 INO80B-WBP1J3KQ70 363 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms