RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ZNF132P52740 706 aa16.77■□□□□ 0.28
PDLIM7-213ENST00000505074 GPR155Q7Z3F1 870 aa16.77■□□□□ 0.28
PDLIM7-213ENST00000505074 BAP1Q92560 729 aa16.77■□□□□ 0.28
PDLIM7-213ENST00000505074 NUP58Q9BVL2 599 aa16.77■□□□□ 0.28
PDLIM7-213ENST00000505074 NAV2Q8IVL1 2488 aa16.77■□□□□ 0.27
PDLIM7-213ENST00000505074 TP53BP1Q12888 1972 aaPredicted RBP16.77■□□□□ 0.27
PDLIM7-213ENST00000505074 MYLKQ15746 1914 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 GREM1O60565 184 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 STC2O76061 302 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 JUPP14923 745 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 HNF1BP35680 557 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 PRCPP42785 496 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 SEMG2Q02383 582 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 TEAD4Q15561 434 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 KIF19Q2TAC6 998 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 GOLGA7BQ2TAP0 167 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 INAVAQ3KP66 663 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 KLHDC10Q6PID8 442 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 SCD5Q86SK9 330 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 SLC4A11Q8NBS3 891 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 C1orf216Q8TAB5 229 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 PRCCQ92733 491 aaPredicted RBP16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 TATDN2Q93075 761 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 SIPA1Q96FS4 1042 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 MKRN2Q9H000 416 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 MARK1Q9P0L2 795 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 FTSJ1Q9UET6 329 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 STRIP2Q9ULQ0 834 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 GTF3C3Q9Y5Q9 886 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 SNX11Q9Y5W9 270 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 AK5Q9Y6K8 562 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 ZNF462Q96JM2 2506 aa16.76■□□□□ 0.27
PDLIM7-213ENST00000505074 NPC1O15118 1278 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 SLC16A3O15427 465 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 TLX3O43711 291 aaPredicted RBP16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 ACADMP11310 421 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 CD19P15391 556 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 CORO1AP31146 461 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 CCT8P50990 548 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 RAD23BP54727 409 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 COG7P83436 770 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 BECN1Q14457 450 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 CBWD6Q4V339 395 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 CBWD3Q5JTY5 395 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 CBWD5Q5RIA9 395 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 ZNF658Q5TYW1 1059 aaPredicted RBP16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 PIGZQ86VD9 579 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 TMPRSS6Q8IU80 811 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 FMR1NBQ8N0W7 255 aaPredicted RBP16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 ARHGAP18Q8N392 663 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 SNX19Q92543 992 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 ERCC4Q92889 916 aaPredicted RBP16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 SMARCE1Q969G3 411 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 PCED1AQ9H1Q7 454 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 CLIC5Q9NZA1 410 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 HESX1Q9UBX0 185 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 HOOK1Q9UJC3 728 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 ZNF510Q9Y2H8 683 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 KNL1Q8NG31 2342 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 PTPRQQ9UMZ3 2332 aa16.75■□□□□ 0.27
PDLIM7-213ENST00000505074 CKAP5Q14008 2032 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 SLC12A8A0AV02 714 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 PCDHGA12O60330 932 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 SYNCRIPO60506 623 aaKnown RBP16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 IGLV3-19P01714 112 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 CISD3P0C7P0 127 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 TKTL1P51854 596 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 YWHAGP61981 247 aaKnown RBP eCLIP16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 YWHAEP62258 255 aaKnown RBP16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 FKBP3Q00688 224 aaKnown RBP16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 LRMPQ12912 555 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 STIM1Q13586 685 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 Q6ZNB5 142 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 IGSF8Q969P0 613 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 FAXDC2Q96IV6 333 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 GSDMAQ96QA5 445 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 DCLK3Q9C098 648 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 LRRC4Q9HBW1 653 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 MARCH2Q9P0N8 246 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 ARMCX3Q9UH62 379 aaPredicted RBP16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 ANKRD6Q9Y2G4 727 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 USP3Q9Y6I4 520 aa16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 COL5A1P20908 1838 aaPredicted RBP16.74■□□□□ 0.27
PDLIM7-213ENST00000505074 TRIM49BA6NDI0 452 aa16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 CYBBP04839 570 aa16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 CDK4P11802 303 aa16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 CHKAP35790 457 aa16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 BCAT1P54687 386 aa16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 CUL2Q13617 745 aa16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 SGO2Q562F6 1265 aa16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 ARHGAP17Q68EM7 881 aa16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 ANKRD40Q6AI12 368 aa16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 ISM2Q6H9L7 571 aa16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 DENND1CQ8IV53 801 aa16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 ANKRD52Q8NB46 1076 aa16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 UCMAQ8WVF2 138 aa16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 IPO9Q96P70 1041 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 ULBP1Q9BZM6 244 aa16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 TSPAN16Q9UKR8 245 aa16.73■□□□□ 0.27
PDLIM7-213ENST00000505074 PCDHGA1Q9Y5H4 931 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms