RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ABCB8Q9NUT2 735 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 KBTBD4Q9NVX7 518 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 TFIP11Q9UBB9 837 aaKnown RBP7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 PLA2G4CQ9UP65 541 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 CABIN1Q9Y6J0 2220 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 DSPP15924 2871 aaKnown RBP7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 KNL1Q8NG31 2342 aa7.21□□□□□ -1.26
NPIPB3-203ENST00000504841 A0A1W2PP55 124 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 J3QKU1 62 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 VILLO15195 856 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 TIMM44O43615 452 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 BRINP1O60477 761 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 HLA-DRAP01903 254 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 IGHV4-34P06331 123 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 PABPC1P11940 636 aaKnown RBP7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 PDCP20941 246 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 HLA-FP30511 346 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 AFMP43652 599 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 ACADVLP49748 655 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 AP3M2P53677 418 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 YWHAGP61981 247 aaKnown RBP eCLIP7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 SNRPFP62306 86 aaKnown RBP7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 RACK1P63244 317 aaKnown RBP7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 SLC39A14Q15043 492 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 KNOP1Q1ED39 458 aaKnown RBP7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 SGSM1Q2NKQ1 1148 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 ZACNQ401N2 412 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 MPPE1Q53F39 396 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 MBLAC2Q68D91 279 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 NCEH1Q6PIU2 408 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 SV2AQ7L0J3 742 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 C12orf56Q8IXR9 622 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 AHI1Q8N157 1196 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 CPXM2Q8N436 756 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 WFIKKN2Q8TEU8 576 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 PARD3BQ8TEW8 1205 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 NDRG1Q92597 394 aaKnown RBP7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 CDK5RAP1Q96SZ6 601 aaKnown RBP7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 LGMNQ99538 433 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 IMPG2Q9BZV3 1241 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 SGK2Q9HBY8 427 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 PNPLA8Q9NP80 782 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 GDF3Q9NR23 364 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 FBXL12Q9NXK8 326 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 CLIC5Q9NZA1 410 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 GGA2Q9UJY4 613 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 NCKAP1Q9Y2A7 1128 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 PCDHGA1Q9Y5H4 931 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 TP53BP1Q12888 1972 aaPredicted RBP7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 WDFY3Q8IZQ1 3526 aa7.2□□□□□ -1.26
NPIPB3-203ENST00000504841 PLXNA2O75051 1894 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 IGSF10Q6WRI0 2623 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 FREM2Q5SZK8 3169 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 TEX51A0A1B0GUA7 166 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 A0A1W2PPC4 97 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 MID1O15344 667 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 MSI1O43347 362 aaKnown RBP7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 DFNA5O60443 496 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 SDC3O75056 442 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 RNASEH2AO75792 299 aaKnown RBP7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 ASS1P00966 412 aaKnown RBP7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 WNT1P04628 370 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 DLDP09622 509 aaKnown RBP7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 TRIM49P0CI25 452 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 TRIM49CP0CI26 452 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 EPHA8P29322 1005 aaPredicted RBP7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 CD70P32970 193 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 HARS2P49590 506 aaKnown RBP7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 SGSHP51688 502 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 GALCP54803 685 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 TLE3Q04726 772 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 ZBTB16Q05516 673 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 EHHADHQ08426 723 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 INCA1Q0VD86 236 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 RTP5Q14D33 572 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 SHBQ15464 509 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 PPP1R26Q5T8A7 1209 aaPredicted RBP7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 FBXL19Q6PCT2 694 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 KDM7AQ6ZMT4 941 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 ADIPOR2Q86V24 386 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 PIGZQ86VD9 579 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 FMNL3Q8IVF7 1028 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 DHX40Q8IX18 779 aaKnown RBP7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 SPACA3Q8IXA5 215 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 ZC3H3Q8IXZ2 948 aaKnown RBP7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 ARHGAP18Q8N392 663 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 IQUBQ8NA54 791 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 SNIP1Q8TAD8 396 aaKnown RBP7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 GOLGA5Q8TBA6 731 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 EDEM1Q92611 657 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 GOLGA1Q92805 767 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 FGF11Q92914 225 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 SKA1Q96BD8 255 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 PLD4Q96BZ4 506 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 TMEM176AQ96HP8 235 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 C7orf25Q9BPX7 421 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 ORAI3Q9BRQ5 295 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 DUSP16Q9BY84 665 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 SLC2A11Q9BYW1 496 aa7.19□□□□□ -1.26
NPIPB3-203ENST00000504841 ULBP1Q9BZM6 244 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms