RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 GNAI1P63096 354 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 WSCD2Q2TBF2 565 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 BTBD16Q32M84 506 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 PKN3Q6P5Z2 889 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 CLEC17AQ6ZS10 378 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 NSUN7Q8NE18 718 aaKnown RBP6.4□□□□□ -1.39
CLCN3-204ENST00000504131 DPF1Q92782 380 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 EMID1Q96A84 441 aaPredicted RBP6.4□□□□□ -1.39
CLCN3-204ENST00000504131 ZNF669Q96BR6 464 aaPredicted RBP6.4□□□□□ -1.39
CLCN3-204ENST00000504131 MCMBPQ9BTE3 642 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 CRB3Q9BUF7 120 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 TUBB1Q9H4B7 451 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 SDHAF2Q9NX18 166 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 GNG8Q9UK08 70 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 STARD13Q9Y3M8 1113 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 NAALAD2Q9Y3Q0 740 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 SNX14Q9Y5W7 946 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 CCDC61Q9Y6R9 512 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 H7C0S8 307 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 ZNF197O14709 1029 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 TM9SF1O15321 606 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 EFCAB14O75071 495 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 SPAG6O75602 509 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 AKR7A3O95154 331 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 FKBP9O95302 570 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 HMGCRP04035 888 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 FEN1P39748 380 aaKnown RBP6.4□□□□□ -1.39
CLCN3-204ENST00000504131 SLC15A1P46059 708 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 HSD17B4P51659 736 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 TSPAN5P62079 268 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 IL18R1Q13478 541 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 PKP1Q13835 747 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 TYW1BQ6NUM6 668 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 VASH1Q7L8A9 365 aaPredicted RBP6.4□□□□□ -1.39
CLCN3-204ENST00000504131 EFHBQ8N7U6 833 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 EXOC2Q96KP1 924 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 ABI2Q9NYB9 513 aaPredicted RBP6.4□□□□□ -1.39
CLCN3-204ENST00000504131 ATXN7L1Q9ULK2 861 aaPredicted RBP6.4□□□□□ -1.39
CLCN3-204ENST00000504131 MYO5CQ9NQX4 1742 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 KIF13AQ9H1H9 1805 aa6.4□□□□□ -1.39
CLCN3-204ENST00000504131 RPRD2Q5VT52 1461 aaKnown RBP6.4□□□□□ -1.39
CLCN3-204ENST00000504131 USP27XA6NNY8 438 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 SNAP23O00161 211 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 ADAMTS4O75173 837 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 SASH3O75995 380 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 F2P00734 622 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 CSTAP01040 98 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 RARGP13631 454 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 AKT1P31749 480 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 FBXO43Q4G163 708 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 KBTBD6Q86V97 674 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 GPBP1Q86WP2 473 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 GALNT11Q8NCW6 608 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 DEPDC1BQ8WUY9 529 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 OTULINQ96BN8 352 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 CSRNP1Q96S65 589 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 UHRF1Q96T88 793 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 PIP5K1AQ99755 562 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 TRIM56Q9BRZ2 755 aaKnown RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 MENTQ9BUN1 341 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 METTL5Q9NRN9 209 aaKnown RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 MRPL22Q9NWU5 206 aaKnown RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 CMTM6Q9NX76 183 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 THUMPD1Q9NXG2 353 aaKnown RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 CHKBQ9Y259 395 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 TMX2Q9Y320 296 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 DUOX2Q9NRD8 1548 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 ADGRL2O95490 1459 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 ERCC6L2Q5T890 1561 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 EIF3DO15371 548 aaKnown RBP eCLIP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 TRAPPC3O43617 180 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 DDAH1O94760 285 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 RORAP35398 523 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 FXR1P51114 621 aaKnown RBP eCLIP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 SEC24CP53992 1094 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 PPARAQ07869 468 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 DBPQ10586 325 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 DLG1Q12959 904 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 AASDHQ4L235 1098 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 RTP2Q5QGT7 225 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 RAB11FIP2Q7L804 512 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 DGKHQ86XP1 1220 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 CYP4Z2PQ8N1L4 340 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 COG1Q8WTW3 980 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 C5orf34Q96MH7 638 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 TCEAL7Q9BRU2 100 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 GAREM1Q9H706 876 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 DCLRE1BQ9H816 532 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 SPACA1Q9HBV2 294 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 ANAPC2Q9UJX6 822 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 PSME2Q9UL46 239 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 ENTPD4Q9Y227 616 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 ASB4Q9Y574 426 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 SOWAHDA6NJG2 315 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 COX4I1P13073 169 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 CHRM3P20309 590 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 M6PRP20645 277 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 BAG6P46379 1132 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 YWHAHQ04917 246 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms