RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 GEMIN4P57678 1058 aaKnown RBP22.02■■□□□ 1.12
UBE2D3-216ENST00000503742 MTFR1Q15390 333 aa22.02■■□□□ 1.12
UBE2D3-216ENST00000503742 TRABD2AQ86V40 505 aa22.02■■□□□ 1.12
UBE2D3-216ENST00000503742 ZNF473Q8WTR7 871 aaKnown RBP22.02■■□□□ 1.12
UBE2D3-216ENST00000503742 P2RY11Q96G91 374 aa22.02■■□□□ 1.12
UBE2D3-216ENST00000503742 DEFB118Q96PH6 123 aa22.02■■□□□ 1.12
UBE2D3-216ENST00000503742 ABI2Q9NYB9 513 aaPredicted RBP22.02■■□□□ 1.12
UBE2D3-216ENST00000503742 OGDHLQ9ULD0 1010 aa22.02■■□□□ 1.12
UBE2D3-216ENST00000503742 PPP1R12AO14974 1030 aaPredicted RBP22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 BRAFP15056 766 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 PGFP49763 221 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 ARHGEF18Q6ZSZ5 1173 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 SCD5Q86SK9 330 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 NETO2Q8NC67 525 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 MARCH5Q9NX47 278 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 ARHGEF38Q9NXL2 777 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 PSMC3IPQ9P2W1 217 aaPredicted RBP22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 OR12D3Q9UGF7 316 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 IRAK2O43187 625 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 ATP2A2P16615 1042 aaKnown RBP22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 KLHL38Q2WGJ6 581 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 PDZD4Q76G19 769 aaPredicted RBP22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 ZNF534Q76KX8 674 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 SCN4BQ8IWT1 228 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 TP53INP2Q8IXH6 220 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 SRRM1Q8IYB3 904 aaKnown RBP22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 C8orf48Q96LL4 319 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 GPR62Q9BZJ7 368 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 OSBPL2Q9H1P3 480 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 RSPH14Q9UHP6 348 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 SCN5AQ14524 2016 aa22.01■■□□□ 1.11
UBE2D3-216ENST00000503742 TANC1Q9C0D5 1861 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 MYO16Q9Y6X6 1858 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 RASA4BC9J798 803 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 RASA4O43374 803 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 OPHN1O60890 802 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 SPAG6O75602 509 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 FDFT1P37268 417 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 AP1B1Q10567 949 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 WASHC5Q12768 1159 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 MPP2Q14168 576 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 FAM171A1Q5VUB5 890 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 BTBD8Q5XKL5 378 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 ZNF317Q96PQ6 595 aaPredicted RBP22■■□□□ 1.11
UBE2D3-216ENST00000503742 EPAS1Q99814 870 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 SMOC2Q9H3U7 446 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 SNX10Q9Y5X0 201 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 PLXNA3P51805 1871 aa22■■□□□ 1.11
UBE2D3-216ENST00000503742 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 RNF103O00237 685 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 PQBP1O60828 265 aaKnown RBP21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 ZNF189O75820 626 aaPredicted RBP21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 LRIG2O94898 1065 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 ALDH2P05091 517 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 FGFR3P22607 806 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 CYP2C18P33260 490 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 MAGEA11P43364 429 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 SLC11A1P49279 550 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 IFRD2Q12894 506 aaPredicted RBP21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 EFTUD2Q15029 972 aaKnown RBP eCLIP21.99■■□□□ 1.114e-8■■■■■ 30.7
UBE2D3-216ENST00000503742 ADGRD1Q6QNK2 874 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 LRRC39Q96DD0 335 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 NMUR1Q9HB89 426 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 LRFN2Q9ULH4 789 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 OR6C75A6NL08 312 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 STK10O94804 968 aaKnown RBP21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 CXCL10P02778 98 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 PKN2Q16513 984 aaKnown RBP21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 CTXN3Q4LDR2 81 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 BRMS1LQ5PSV4 323 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 NPAS4Q8IUM7 802 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 NUP93Q8N1F7 819 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 NPWQ8N729 165 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 COLGALT1Q8NBJ5 622 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 PRMT1Q99873 361 aaKnown RBP21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 FERMT1Q9BQL6 677 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 SENP1Q9P0U3 644 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 SCML2Q9UQR0 700 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 PCDHB5Q9Y5E4 795 aa21.99■■□□□ 1.11
UBE2D3-216ENST00000503742 TCRBV9S1A1TA0A576 114 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 TRIM66O15016 1216 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 NCAM2O15394 837 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 HOXA2O43364 376 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 CDK16Q00536 496 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 DENND5BQ6ZUT9 1274 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 CCNYQ8ND76 341 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 CHMP6Q96FZ7 201 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 PAFAH2Q99487 392 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 KCNK9Q9NPC2 374 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 HCSTQ9UBK5 93 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 MYO18AQ92614 2054 aaKnown RBP21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 EBAG9O00559 213 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 MYCP01106 439 aaPredicted RBP21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 DRD4P21917 467 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 GPR15P49685 360 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 PPIDQ08752 370 aaKnown RBP21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 DDR2Q16832 855 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 ZNF280DQ6N043 979 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 CEP57Q86XR8 500 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 CASP10Q92851 521 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms