RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ZPR1O75312 459 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 LRRN2O75325 713 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SERPINB7O75635 380 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 RSPH10BP0C881 870 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 HOXB6P17509 224 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ARFIP2P53365 341 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 BASP1P80723 227 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PDE4BQ07343 736 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 MTMR1Q13613 665 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF239Q16600 458 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SOWAHAQ2M3V2 549 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ARL13BQ3SXY8 428 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TMEM67Q5HYA8 995 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 METTL21CQ5VZV1 264 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 RRAGAQ7L523 313 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 USP17L1Q7RTZ2 530 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CLNKQ7Z7G1 428 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PALB2Q86YC2 1186 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CCNJLQ8IV13 435 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CCDC105Q8IYK2 499 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PM20D2Q8IYS1 436 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TTLL6Q8N841 843 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PRMT6Q96LA8 375 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ARPC5LQ9BPX5 153 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 BCL7BQ9BQE9 202 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 C1orf21Q9H246 121 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF287Q9HBT7 754 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 HMG20AQ9NP66 347 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PCMTD2Q9NV79 361 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 STMN3Q9NZ72 180 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TNFRSF10DQ9UBN6 386 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 GNPTGQ9UJJ9 305 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 MKL2Q9ULH7 1088 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 MRPL11Q9Y3B7 192 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 I3L4J1 428 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 DAPK3O43293 454 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 GUCY1B2O75343 617 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SCELO95171 688 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF23P17027 643 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TYMPP19971 482 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CCNCP24863 283 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SERPINB10P48595 397 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TKTL1P51854 596 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PTPN5P54829 565 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 BPIFB4P59827 614 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TEKQ02763 1124 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SMARCB1Q12824 385 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 AUHQ13825 339 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 WTAPQ15007 396 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CRY1Q16526 586 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 FAM83BQ5T0W9 1011 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 KRT39Q6A163 491 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 NFRKBQ6P4R8 1299 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SLC26A9Q7LBE3 791 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF410Q86VK4 478 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 MMAAQ8IVH4 418 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CMTR1Q8N1G2 835 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 MARVELD2Q8N4S9 558 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SLC2A14Q8TDB8 520 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 FUBP3Q96I24 572 aaKnown RBP eCLIP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PRPF18Q99633 342 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CTRCQ99895 268 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 RRN3Q9NYV6 651 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 MOCS1Q9NZB8 636 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SUCOQ9UBS9 1254 aaKnown RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 RAB26Q9ULW5 256 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 GIT1Q9Y2X7 761 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 A8MVJ9 347 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 FAM47E-STBD1D6RA91 191 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 H0Y3Z8 333 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ALOX15BO15296 676 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TM9SF1O15321 606 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 MSH4O15457 936 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 MAN1A2O60476 641 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TM7SF2O76062 418 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 VNN2O95498 520 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PFKMP08237 780 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 AKR1B1P15121 316 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 RAP1GAPP47736 663 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 PRIM2P49643 509 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ECT2LQ008S8 904 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ASIC2Q16515 512 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TRIM16LQ309B1 348 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 COQ5Q5HYK3 327 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 RNF220Q5VTB9 566 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SLFN13Q68D06 897 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CIAPIN1Q6FI81 312 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 KRT80Q6KB66 452 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 MICU3Q86XE3 530 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ZUFSPQ96AP4 578 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 MCCC1Q96RQ3 725 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ECSITQ9BQ95 431 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 NAPBQ9H115 298 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF696Q9H7X3 374 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 CHST12Q9NRB3 414 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 SYBUQ9NX95 663 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TAS2R1Q9NYW7 299 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 TRIM10Q9UDY6 481 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 APPL1Q9UKG1 709 aa2.87□□□□□ -1.95
NEDD4-204ENST00000503468 KPNA6O60684 536 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms