RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 TMEM199Q8N511 208 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 ARFGAP2Q8N6H7 521 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 HTR3CQ8WXA8 447 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 TLCD1Q96CP7 247 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 IGSF21Q96ID5 467 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 SERPINB11Q96P15 392 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 HTATIP2Q9BUP3 242 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 STMN4Q9H169 189 aaPredicted RBP22.71■■□□□ 1.23
PTPN13-205ENST00000502971 RAB6BQ9NRW1 208 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 PRKAG2Q9UGJ0 569 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 NOVA2Q9UNW9 492 aaKnown RBP22.71■■□□□ 1.23
PTPN13-205ENST00000502971 BACE2Q9Y5Z0 518 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 TLDC2A0PJX2 215 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 E7ESA3 106 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 RGS16O15492 202 aaPredicted RBP22.71■■□□□ 1.23
PTPN13-205ENST00000502971 EFCAB14O75071 495 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 TMEM63AO94886 807 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 YWHAQP27348 245 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 HTR7P34969 479 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 GLUD2P49448 558 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 PGFP49763 221 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 RPL10AP62906 217 aaKnown RBP22.71■■□□□ 1.23
PTPN13-205ENST00000502971 STAT4Q14765 748 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 PRKD1Q15139 912 aaPredicted RBP22.71■■□□□ 1.23
PTPN13-205ENST00000502971 MGAT5BQ3V5L5 792 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 PDIK1LQ8N165 341 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 TTC9BQ8N6N2 239 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 CASP10Q92851 521 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 ZNF689Q96CS4 500 aaPredicted RBP22.71■■□□□ 1.23
PTPN13-205ENST00000502971 ABHD8Q96I13 439 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 SERPINB12Q96P63 405 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 MTRRQ9UBK8 725 aa22.71■■□□□ 1.23
PTPN13-205ENST00000502971 A0A087WUV0 522 aaPredicted RBP22.7■■□□□ 1.22
PTPN13-205ENST00000502971 TCRBV7S3A2A0A539 114 aa22.7■■□□□ 1.22
PTPN13-205ENST00000502971 GOLGA8MH3BSY2 632 aa22.7■■□□□ 1.22
PTPN13-205ENST00000502971 NCAM2O15394 837 aa22.7■■□□□ 1.22
PTPN13-205ENST00000502971 VNN2O95498 520 aa22.7■■□□□ 1.22
PTPN13-205ENST00000502971 IVLP07476 585 aa22.7■■□□□ 1.22
PTPN13-205ENST00000502971 PSEN1P49768 467 aa22.7■■□□□ 1.22
PTPN13-205ENST00000502971 SLC8B1Q6J4K2 584 aa22.7■■□□□ 1.22
PTPN13-205ENST00000502971 PRSS55Q6UWB4 352 aaPredicted RBP22.7■■□□□ 1.22
PTPN13-205ENST00000502971 ZBED8Q8IZ13 594 aa22.7■■□□□ 1.22
PTPN13-205ENST00000502971 TAB3Q8N5C8 712 aaPredicted RBP22.7■■□□□ 1.22
PTPN13-205ENST00000502971 FBXO22Q8NEZ5 403 aa22.7■■□□□ 1.22
PTPN13-205ENST00000502971 CCDC110Q8TBZ0 833 aa22.7■■□□□ 1.22
PTPN13-205ENST00000502971 EPS8L3Q8TE67 593 aaKnown RBP22.7■■□□□ 1.22
PTPN13-205ENST00000502971 CEP295NLQ96MC4 621 aa22.7■■□□□ 1.22
PTPN13-205ENST00000502971 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.7■■□□□ 1.22
PTPN13-205ENST00000502971 SFMBT1Q9UHJ3 866 aa22.7■■□□□ 1.22
PTPN13-205ENST00000502971 SLC27A5Q9Y2P5 690 aa22.7■■□□□ 1.22
PTPN13-205ENST00000502971 MYO16Q9Y6X6 1858 aa22.7■■□□□ 1.22
PTPN13-205ENST00000502971 STK10O94804 968 aaKnown RBP22.69■■□□□ 1.22
PTPN13-205ENST00000502971 AGTP01019 485 aa22.69■■□□□ 1.22
PTPN13-205ENST00000502971 LMAN1P49257 510 aa22.69■■□□□ 1.22
PTPN13-205ENST00000502971 USP46P62068 366 aa22.69■■□□□ 1.22
PTPN13-205ENST00000502971 FNBP1LQ5T0N5 605 aa22.69■■□□□ 1.22
PTPN13-205ENST00000502971 SEPT5Q99719 369 aaPredicted RBP22.69■■□□□ 1.22
PTPN13-205ENST00000502971 BRD8Q9H0E9 1235 aa22.69■■□□□ 1.22
PTPN13-205ENST00000502971 OSER1Q9NX31 292 aa22.69■■□□□ 1.22
PTPN13-205ENST00000502971 CLIC5Q9NZA1 410 aa22.69■■□□□ 1.22
PTPN13-205ENST00000502971 GMIPQ9P107 970 aa22.69■■□□□ 1.22
PTPN13-205ENST00000502971 CDY1Q9Y6F8 540 aa22.69■■□□□ 1.22
PTPN13-205ENST00000502971 CARNS1A5YM72 827 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 LRIG2O94898 1065 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 VAV1P15498 845 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 SERPINB6P35237 376 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 DNAJC21Q5F1R6 531 aaKnown RBP22.68■■□□□ 1.22
PTPN13-205ENST00000502971 VPS52Q8N1B4 723 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 LRRN4Q8WUT4 740 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 FBXO32Q969P5 355 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 LGMNQ99538 433 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 ETNK1Q9HBU6 452 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 ZMYND8Q9ULU4 1186 aaPredicted RBP22.68■■□□□ 1.22
PTPN13-205ENST00000502971 COL4A6Q14031 1691 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 A0A0A0MRY4 1105 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 TSHRP16473 764 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 EPHB2P29323 1055 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 MAGOHP61326 146 aaKnown RBP22.68■■□□□ 1.22
PTPN13-205ENST00000502971 GAD2Q05329 585 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 DUSP4Q13115 394 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 AUHQ13825 339 aaKnown RBP22.68■■□□□ 1.22
PTPN13-205ENST00000502971 FASTKD3Q14CZ7 662 aaKnown RBP22.68■■□□□ 1.22
PTPN13-205ENST00000502971 PSMD5Q16401 504 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 TNFAIP8L3Q5GJ75 292 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 SPOUT1Q5T280 376 aaKnown RBP22.68■■□□□ 1.22
PTPN13-205ENST00000502971 ARHGEF18Q6ZSZ5 1173 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 CCDC33Q8N5R6 958 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 STKLD1Q8NE28 680 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 SPATA13Q96N96 652 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 ZNF558Q96NG5 402 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 CRISPLD1Q9H336 500 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 PRDM12Q9H4Q4 367 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 TLR8Q9NR97 1041 aaKnown RBP22.68■■□□□ 1.22
PTPN13-205ENST00000502971 OLA1Q9NTK5 396 aaKnown RBP22.68■■□□□ 1.22
PTPN13-205ENST00000502971 TLR6Q9Y2C9 796 aa22.68■■□□□ 1.22
PTPN13-205ENST00000502971 SMIM23A6NLE4 172 aa22.67■■□□□ 1.22
PTPN13-205ENST00000502971 KCNU1A8MYU2 1149 aa22.67■■□□□ 1.22
PTPN13-205ENST00000502971 SHOX2O60902 331 aaPredicted RBP22.67■■□□□ 1.22
PTPN13-205ENST00000502971 SLC2A3P11169 496 aa22.67■■□□□ 1.22
PTPN13-205ENST00000502971 MX2P20592 715 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms