RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 ZNF362Q5T0B9 420 aaPredicted RBP7.06□□□□□ -1.28
NEDD4-203ENST00000502612 PCSK4Q6UW60 755 aa7.06□□□□□ -1.28
NEDD4-203ENST00000502612 GLMPQ8WWB7 406 aa7.06□□□□□ -1.28
NEDD4-203ENST00000502612 HERVK_113Q902F9 699 aa7.06□□□□□ -1.28
NEDD4-203ENST00000502612 HERC2P3Q9BVR0 1158 aa7.06□□□□□ -1.28
NEDD4-203ENST00000502612 PLEKHA2Q9HB19 425 aa7.06□□□□□ -1.28
NEDD4-203ENST00000502612 SERGEFQ9UGK8 458 aa7.06□□□□□ -1.28
NEDD4-203ENST00000502612 VPS8Q8N3P4 1428 aa7.06□□□□□ -1.28
NEDD4-203ENST00000502612 DNMBPQ6XZF7 1577 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 TBC1D3DA0A087WVF3 549 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 TBC1D3IA0A087WXS9 549 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 TBC1D3EA0A087X179 549 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 TBC1D3KA0A087X1G2 549 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 TBC1D3BA6NDS4 549 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 TBC1D3FA6NER0 549 aaPredicted RBP7.05□□□□□ -1.28
NEDD4-203ENST00000502612 TBC1D3LB9A6J9 549 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 TBC1D3HP0C7X1 549 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 WDR5P61964 334 aaKnown RBP7.05□□□□□ -1.28
NEDD4-203ENST00000502612 RBM6P78332 1123 aaKnown RBP7.05□□□□□ -1.28
NEDD4-203ENST00000502612 POU5F1BQ06416 359 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 SLC12A1Q13621 1099 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 CBFBQ13951 182 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 FHL2Q14192 279 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 ZNF484Q5JVG2 852 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 AKNAD1Q5T1N1 836 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 TBC1D3GQ6DHY5 549 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 TBC1D3CQ6IPX1 549 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 OLFML1Q6UWY5 402 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 TRIM72Q6ZMU5 477 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 MMS22LQ6ZRQ5 1243 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 ZNF804AQ7Z570 1209 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 ANKS1BQ7Z6G8 1248 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 GRASPQ7Z6J2 395 aaPredicted RBP7.05□□□□□ -1.28
NEDD4-203ENST00000502612 TBC1D3Q8IZP1 549 aaPredicted RBP7.05□□□□□ -1.28
NEDD4-203ENST00000502612 USP13Q92995 863 aaPredicted RBP7.05□□□□□ -1.28
NEDD4-203ENST00000502612 SDCCAG3Q96C92 435 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 TWNKQ96RR1 684 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 IFT80Q9P2H3 777 aaPredicted RBP7.05□□□□□ -1.28
NEDD4-203ENST00000502612 TLK1Q9UKI8 766 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 CRYL1Q9Y2S2 319 aa7.05□□□□□ -1.28
NEDD4-203ENST00000502612 TCRBV5S1A1TA0A578 114 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 C16orf96A6NNT2 1141 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 CLIC1O00299 241 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 RAMP2O60895 175 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 MT-CO3P00414 261 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 CSF1P09603 554 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 NHLRC4P0CG21 123 aaPredicted RBP7.04□□□□□ -1.28
NEDD4-203ENST00000502612 ACVRL1P37023 503 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 AGTR2P50052 363 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 CCR5P51681 352 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 RCAN1P53805 252 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 CACNA2D1P54289 1103 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 CEP85Q6P2H3 762 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 DCDC5Q6ZRR9 648 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 MRGPRGQ86SM5 289 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 TMTC1Q8IUR5 882 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 TMEM57Q8N5G2 664 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 LINS1Q8NG48 757 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 AKAP1Q92667 903 aaKnown RBP eCLIP7.04□□□□□ -1.28
NEDD4-203ENST00000502612 KTI12Q96EK9 354 aaPredicted RBP7.04□□□□□ -1.28
NEDD4-203ENST00000502612 DAZAP1Q96EP5 407 aaKnown RBP7.04□□□□□ -1.28
NEDD4-203ENST00000502612 HS6ST2Q96MM7 605 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 UROC1Q96N76 676 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 DUSP26Q9BV47 211 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 SYNPO2LQ9H987 977 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 GJD2Q9UKL4 321 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 DNAJC16Q9Y2G8 782 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 DERAQ9Y315 318 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 CUX2O14529 1486 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 FGD5Q6ZNL6 1462 aa7.04□□□□□ -1.28
NEDD4-203ENST00000502612 MBD3L5A6NJ08 208 aaPredicted RBP7.03□□□□□ -1.28
NEDD4-203ENST00000502612 PRYO14603 147 aa7.03□□□□□ -1.28
NEDD4-203ENST00000502612 TFRCP02786 760 aaKnown RBP7.03□□□□□ -1.28
NEDD4-203ENST00000502612 LYL1P12980 280 aa7.03□□□□□ -1.28
NEDD4-203ENST00000502612 MATN1P21941 496 aa7.03□□□□□ -1.28
NEDD4-203ENST00000502612 NDUFS1P28331 727 aa7.03□□□□□ -1.28
NEDD4-203ENST00000502612 DUSP1P28562 367 aa7.03□□□□□ -1.28
NEDD4-203ENST00000502612 STAT6P42226 847 aa7.03□□□□□ -1.28
NEDD4-203ENST00000502612 SLC14A1Q13336 389 aa7.03□□□□□ -1.28
NEDD4-203ENST00000502612 DCTN1Q14203 1278 aa7.03□□□□□ -1.28
NEDD4-203ENST00000502612 SLC2A12Q8TD20 617 aa7.03□□□□□ -1.28
NEDD4-203ENST00000502612 MAELQ96JY0 434 aaKnown RBP7.03□□□□□ -1.28
NEDD4-203ENST00000502612 ADGRE3Q9BY15 652 aa7.03□□□□□ -1.28
NEDD4-203ENST00000502612 PRDM13Q9H4Q3 707 aa7.03□□□□□ -1.28
NEDD4-203ENST00000502612 PDP2Q9P2J9 529 aa7.03□□□□□ -1.28
NEDD4-203ENST00000502612 SLC17A6Q9P2U8 582 aa7.03□□□□□ -1.28
NEDD4-203ENST00000502612 B3GNT3Q9Y2A9 372 aa7.03□□□□□ -1.28
NEDD4-203ENST00000502612 RRP7AQ9Y3A4 280 aaKnown RBP7.03□□□□□ -1.28
NEDD4-203ENST00000502612 SMIM22K7EJ46 135 aa7.02□□□□□ -1.29
NEDD4-203ENST00000502612 SH3BP5O60239 455 aa7.02□□□□□ -1.29
NEDD4-203ENST00000502612 FSHBP01225 129 aa7.02□□□□□ -1.29
NEDD4-203ENST00000502612 CYP3A4P08684 503 aa7.02□□□□□ -1.29
NEDD4-203ENST00000502612 CLK3P49761 638 aaKnown RBP7.02□□□□□ -1.29
NEDD4-203ENST00000502612 HOXA4Q00056 320 aaPredicted RBP7.02□□□□□ -1.29
NEDD4-203ENST00000502612 COL10A1Q03692 680 aa7.02□□□□□ -1.29
NEDD4-203ENST00000502612 TLE3Q04726 772 aa7.02□□□□□ -1.29
NEDD4-203ENST00000502612 EFR3AQ14156 821 aa7.02□□□□□ -1.29
NEDD4-203ENST00000502612 KCNB1Q14721 858 aa7.02□□□□□ -1.29
NEDD4-203ENST00000502612 TBRG1Q3YBR2 411 aa7.02□□□□□ -1.29
NEDD4-203ENST00000502612 WDR93Q6P2C0 686 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms