RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 NME9Q86XW9 330 aa3.91□□□□□ -1.78
SUB1-202ENST00000502453 MIB1Q86YT6 1006 aa3.91□□□□□ -1.78
SUB1-202ENST00000502453 AOPEPQ8N6M6 819 aa3.91□□□□□ -1.78
SUB1-202ENST00000502453 NLGN2Q8NFZ4 835 aa3.91□□□□□ -1.78
SUB1-202ENST00000502453 RAB7BQ96AH8 199 aa3.91□□□□□ -1.78
SUB1-202ENST00000502453 EPSTI1Q96J88 318 aa3.91□□□□□ -1.78
SUB1-202ENST00000502453 FAM167AQ96KS9 214 aa3.91□□□□□ -1.78
SUB1-202ENST00000502453 INTS14Q96SY0 518 aa3.91□□□□□ -1.78
SUB1-202ENST00000502453 FUZQ9BT04 418 aa3.91□□□□□ -1.78
SUB1-202ENST00000502453 TWSG1Q9GZX9 223 aa3.91□□□□□ -1.78
SUB1-202ENST00000502453 CDIP1Q9H305 208 aa3.91□□□□□ -1.78
SUB1-202ENST00000502453 G6PC2Q9NQR9 355 aa3.91□□□□□ -1.78
SUB1-202ENST00000502453 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.91□□□□□ -1.78
SUB1-202ENST00000502453 ATAD3AQ9NVI7 634 aa3.91□□□□□ -1.78
SUB1-202ENST00000502453 SH3BP4Q9P0V3 963 aa3.91□□□□□ -1.78
SUB1-202ENST00000502453 NUMBLQ9Y6R0 609 aa3.91□□□□□ -1.78
SUB1-202ENST00000502453 RUSC2Q8N2Y8 1516 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 WIZO95785 1651 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 LOC100289279A0A1B0GTE1 492 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 LIPT2A6NK58 231 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 TMEM232C9JQI7 657 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 H7C4K7 107 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 TMPRSS2O15393 492 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 SIGLEC6O43699 453 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 ZC3H11AO75152 810 aaKnown RBP eCLIP3.9□□□□□ -1.78
SUB1-202ENST00000502453 NPPAP01160 153 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 S100A6P06703 90 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 TTKP33981 857 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 BMPR1AP36894 532 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 TAGLN2P37802 199 aaKnown RBP3.9□□□□□ -1.78
SUB1-202ENST00000502453 PMS2P54278 862 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 MFAP4P55083 255 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 ARF5P84085 180 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 ELP6Q0PNE2 266 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 CRYMQ14894 314 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 PLEKHS1Q5SXH7 462 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 CACNA2D4Q7Z3S7 1137 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 ANKS1BQ7Z6G8 1248 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 GRAMD2AQ8IUY3 354 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 RHOT2Q8IXI1 618 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 NAT16Q8N8M0 369 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 DNAJB8Q8NHS0 232 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 VWCEQ96DN2 955 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 THUMPD2Q9BTF0 503 aaKnown RBP3.9□□□□□ -1.78
SUB1-202ENST00000502453 FOXP3Q9BZS1 431 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 CARD9Q9H257 536 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 VCX3BQ9H321 246 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 SMURF2Q9HAU4 748 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 TM9SF3Q9HD45 589 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 RBM12Q9NTZ6 932 aaKnown RBP3.9□□□□□ -1.78
SUB1-202ENST00000502453 PLA2G3Q9NZ20 509 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 EXTL2Q9UBQ6 330 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 WDR62O43379 1518 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 HNRNPCL2B2RXH8 293 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 H7C1W4 665 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 PPEF2O14830 753 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 TROVE2P10155 538 aaKnown RBP eCLIP3.9□□□□□ -1.78
SUB1-202ENST00000502453 PEPDP12955 493 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 VAV1P15498 845 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 PTPN1P18031 435 aaKnown RBP3.9□□□□□ -1.78
SUB1-202ENST00000502453 ERCC2P18074 760 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 SLC15A1P46059 708 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 BMXP51813 675 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 PPATQ06203 517 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 IGSF11Q5DX21 431 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 RAB41Q5JT25 222 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 C6orf163Q5TEZ5 329 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 SLFN12LQ6IEE8 588 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 CORO6Q6QEF8 472 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 SYT9Q86SS6 491 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 ADGRF2Q8IZF7 708 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 FBXW8Q8N3Y1 598 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 DNAJC5GQ8N7S2 189 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 CNNM3Q8NE01 707 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 MDM1Q8TC05 714 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 METTL21AQ8WXB1 218 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 PTERQ96BW5 349 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 DDX50Q9BQ39 737 aaKnown RBP3.9□□□□□ -1.78
SUB1-202ENST00000502453 ZNF518BQ9C0D4 1074 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 SERINC1Q9NRX5 453 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 COX16Q9P0S2 106 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 APPL1Q9UKG1 709 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 ATP11BQ9Y2G3 1177 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 WDR97A6NE52 1622 aa3.9□□□□□ -1.78
SUB1-202ENST00000502453 MAP3K19Q56UN5 1328 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 SHISA3A0PJX4 238 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 PRAMEF22A3QJZ6 481 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 NCF1BA6NI72 391 aaPredicted RBP3.9□□□□□ -1.79
SUB1-202ENST00000502453 C16orf96A6NNT2 1141 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 NCF1CA8MVU1 366 aaPredicted RBP3.9□□□□□ -1.79
SUB1-202ENST00000502453 CAPN14A8MX76 684 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 ERLIN1O75477 346 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 ADAMTS2O95450 1211 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 HMGCRP04035 888 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 PDE1AP54750 535 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 HADHBP55084 474 aaKnown RBP3.9□□□□□ -1.79
SUB1-202ENST00000502453 B2MP61769 119 aa3.9□□□□□ -1.79
SUB1-202ENST00000502453 PPIDQ08752 370 aaKnown RBP3.9□□□□□ -1.79
SUB1-202ENST00000502453 TRA2AQ13595 282 aaKnown RBP eCLIP3.9□□□□□ -1.79
SUB1-202ENST00000502453 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms