RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 ZNF385DQ9H6B1 395 aa7.44□□□□□ -1.22
LYSMD3-203ENST00000500869 UGT1A7Q9HAW7 530 aa7.44□□□□□ -1.22
LYSMD3-203ENST00000500869 UGT1A10Q9HAW8 530 aa7.44□□□□□ -1.22
LYSMD3-203ENST00000500869 UGT1A8Q9HAW9 530 aa7.44□□□□□ -1.22
LYSMD3-203ENST00000500869 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.44□□□□□ -1.22
LYSMD3-203ENST00000500869 PDP2Q9P2J9 529 aa7.44□□□□□ -1.22
LYSMD3-203ENST00000500869 SOX13Q9UN79 622 aa7.44□□□□□ -1.22
LYSMD3-203ENST00000500869 AP4E1Q9UPM8 1137 aa7.44□□□□□ -1.22
LYSMD3-203ENST00000500869 SLC45A1Q9Y2W3 748 aa7.44□□□□□ -1.22
LYSMD3-203ENST00000500869 TANC1Q9C0D5 1861 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 CAPN9O14815 690 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 INSRRP14616 1297 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 DNAJB2P25686 324 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 TMPRSS15P98073 1019 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 ZNF33AQ06730 810 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 MARCH8Q5T0T0 291 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 KCTD11Q693B1 232 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 ERO1BQ86YB8 467 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 CCDC117Q8IWD4 279 aaPredicted RBP7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 KBTBD2Q8IY47 623 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 C7orf31Q8N865 590 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 TFB1MQ8WVM0 346 aaKnown RBP7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 TRAPPC12Q8WVT3 735 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 SPDL1Q96EA4 605 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 MMP19Q99542 508 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 SYT15Q9BQS2 421 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 VCXQ9H320 206 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 EPB41L1Q9H4G0 881 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 XPNPEP3Q9NQH7 507 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 SLC7A8Q9UHI5 535 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 A0A087WZ62 844 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 ERI2A8K979 691 aaKnown RBP7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 XPO1O14980 1071 aaKnown RBP7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 CACNG3O60359 315 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 KCNE1P15382 129 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 WARSP23381 471 aaKnown RBP7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 AXLP30530 894 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 ADSLP30566 484 aaPredicted RBP7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 GBE1Q04446 702 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 PDE1CQ14123 709 aaPredicted RBP7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 MUM1Q2TAK8 710 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 SLC25A52Q3SY17 297 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 SH2D4BQ5SQS7 431 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 KCNT2Q6UVM3 1135 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 RDH11Q8TC12 318 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 FDXACB1Q9BRP7 624 aaPredicted RBP7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 MECRQ9BV79 373 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 PCDHB12Q9Y5F1 795 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 B2RBV5 119 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 DCLK1O15075 740 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 MAP3K7O43318 606 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 SNUPNO95149 360 aaKnown RBP7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 APRTP07741 180 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 GJB1P08034 283 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 AMPD1P23109 780 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 HADHAP40939 763 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 MATKP42679 507 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 AQP5P55064 265 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 ZBTB16Q05516 673 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 ORC1Q13415 861 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 FASTKD1Q53R41 847 aaKnown RBP7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 RIPOR1Q6ZS17 1223 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 ARID3BQ8IVW6 561 aaPredicted RBP7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 NDUFAF2Q8N183 169 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 DEPDC1BQ8WUY9 529 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 MRRFQ96E11 262 aaKnown RBP7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 NPY6RQ99463 290 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 TXNRD2Q9NNW7 524 aa7.43□□□□□ -1.22
LYSMD3-203ENST00000500869 MPOP05164 745 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 PNPLA4P41247 253 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 POLD2P49005 469 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 CSE1LP55060 971 aaKnown RBP7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 AP2B1P63010 937 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 HERC3Q15034 1050 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 EFHC1Q5JVL4 640 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 HEATR6Q6AI08 1181 aaKnown RBP7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 TMEM135Q86UB9 458 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 WDR75Q8IWA0 830 aaKnown RBP7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 FBXO16Q8IX29 292 aaPredicted RBP7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 SCML4Q8N228 414 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 CPSF7Q8N684 471 aaKnown RBP7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 ZNF483Q8TF39 744 aaPredicted RBP7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 CDKL2Q92772 493 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 STMN2Q93045 179 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 DNAI2Q9GZS0 605 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 CASS4Q9NQ75 786 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 PCMTD2Q9NV79 361 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 GPATCH2LQ9NWQ4 482 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 APOBEC2Q9Y235 224 aaKnown RBP7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 CIB2O75838 187 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 USP1O94782 785 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 TXNP10599 105 aaKnown RBP7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 CYP2C9P11712 490 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 HOXA11P31270 313 aaPredicted RBP7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 GP5P40197 560 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 SLC1A6P48664 564 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 TUBP50607 506 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 CCNHP51946 323 aaPredicted RBP7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 LIMK2P53671 638 aa7.42□□□□□ -1.22
LYSMD3-203ENST00000500869 THOC5Q13769 683 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms