RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 ITGB5P18084 799 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 S100A1P23297 94 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 CASP4P49662 377 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 IFITM3Q01628 133 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 COG2Q14746 738 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 STILQ15468 1287 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 STK11Q15831 433 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 MTERF2Q49AM1 385 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 SLC45A4Q5BKX6 768 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 CCDC137Q6PK04 289 aaKnown RBP5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 SLFN11Q7Z7L1 901 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 TP53I13Q8NBR0 393 aaPredicted RBP5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 ETNPPLQ8TBG4 499 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 PPP1R16BQ96T49 567 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 SLC29A1Q99808 456 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 MXRA8Q9BRK3 442 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 TMEM106CQ9BVX2 250 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 TP63Q9H3D4 680 aaPredicted RBP5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 ZDHHC7Q9NXF8 308 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 DKK3Q9UBP4 350 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 KLHL3Q9UH77 587 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 SEPT9Q9UHD8 586 aaPredicted RBP5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 SLC27A5Q9Y2P5 690 aa5.96□□□□□ -1.46
SOX2-OT-218ENST00000498731 LAMA3Q16787 3333 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 ATRNL1Q5VV63 1379 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 SOBPA7XYQ1 873 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 SPECC1L-ADORA2AF8WAN1 911 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 GOLGA8TH3BQL2 631 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 CCDC188H7C350 402 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 FCHO1O14526 889 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 CNOT3O75175 753 aaKnown RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 GABBR2O75899 941 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 SLITRK3O94933 977 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 IGHA2P01877 340 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 INHBBP09529 407 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 SPATA31C1P0DKV0 1188 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 RAG1P15918 1043 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 BMXP51813 675 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 CTAG1AP78358 180 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 KCNC4Q03721 635 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 ITGADQ13349 1161 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 DNASE1L3Q13609 305 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 MAN2A1Q16706 1144 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 SWSAP1Q6NVH7 229 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 ALKBH5Q6P6C2 394 aaKnown RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 PADI6Q6TGC4 694 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 OTOP1Q7RTM1 612 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 RSPH3Q86UC2 560 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 VPS36Q86VN1 386 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 GUF1Q8N442 669 aaKnown RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 PPHLN1Q8NEY8 458 aaKnown RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 OR7G1Q8NGA0 311 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 GSDMBQ8TAX9 411 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 LNX1Q8TBB1 728 aaPredicted RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 TBC1D15Q8TC07 691 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 GTF3C2Q8WUA4 911 aaPredicted RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 LPAR1Q92633 364 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 CLP1Q92989 425 aaKnown RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 DNAJC19Q96DA6 116 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 CEP170P1Q96L14 293 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 TEPSINQ96N21 525 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 NACC1Q96RE7 527 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 CTRCQ99895 268 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 FANCEQ9HB96 536 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 PARVGQ9HBI0 331 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 PLGRKTQ9HBL7 147 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 KIAA1586Q9HCI6 787 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 TBC1D14Q9P2M4 693 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 UVRAGQ9P2Y5 699 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 MARCOQ9UEW3 520 aaPredicted RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 ANGPTL2Q9UKU9 493 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 RNF11Q9Y3C5 154 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 BOLA1Q9Y3E2 137 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 FAM47DPA6NHR8 397 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 VSTM5A8MXK1 200 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 TISP43B9A030 160 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 VWA5AO00534 786 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 TOR1BO14657 336 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 AXIN1O15169 862 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 SLC16A4O15374 487 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 MAGEB2O15479 319 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 NR3C2P08235 984 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 TRIM49P0CI25 452 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 TRIM49CP0CI26 452 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 HSPA1AP0DMV8 641 aaKnown RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 HSPA1BP0DMV9 641 aaKnown RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 MUTP22033 750 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 FDFT1P37268 417 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 ARL1P40616 181 aaPredicted RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 VEGFBP49765 207 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 CNTN2Q02246 1040 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 STRN3Q13033 797 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 OASLQ15646 514 aaKnown RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 TMEM119Q4V9L6 283 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 COBLL1Q53SF7 1204 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 PERM1Q5SV97 790 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 COL13A1Q5TAT6 717 aaPredicted RBP5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 RINT1Q6NUQ1 792 aa5.95□□□□□ -1.46
SOX2-OT-218ENST00000498731 AAGABQ6PD74 315 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms