RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 VDRP11473 427 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 PRKCHP24723 683 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 COPAP53621 1224 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 FKBP3Q00688 224 aaKnown RBP12.55□□□□□ -0.4
CNOT4-211ENST00000498534 ADIGQ0VDE8 80 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 CAMK2GQ13555 558 aaPredicted RBP12.55□□□□□ -0.4
CNOT4-211ENST00000498534 SUZ12Q15022 739 aaKnown RBP12.55□□□□□ -0.4
CNOT4-211ENST00000498534 TMEM215Q68D42 235 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 SMYD4Q8IYR2 804 aaPredicted RBP12.55□□□□□ -0.4
CNOT4-211ENST00000498534 PNPLA1Q8N8W4 532 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 UBA3Q8TBC4 463 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 KCTD13Q8WZ19 329 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 EDEM1Q92611 657 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 FBRSQ9HAH7 460 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 TM7SF3Q9NS93 570 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 SUN2Q9UH99 717 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 SFMBT1Q9UHJ3 866 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 ZDHHC9Q9Y397 364 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 COQ4Q9Y3A0 265 aa12.55□□□□□ -0.4
CNOT4-211ENST00000498534 ANKRD11Q6UB99 2663 aaPredicted RBP12.55□□□□□ -0.4
CNOT4-211ENST00000498534 ATRXP46100 2492 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 PKD1L2Q7Z442 2459 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 ZFYVE26Q68DK2 2539 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 GOLGA6L4A6NEF3 574 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 YJEFN3A6XGL0 299 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 E7ENQ6 273 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 TULP2O00295 520 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 SLC16A3O15427 465 aaKnown RBP12.54□□□□□ -0.4
CNOT4-211ENST00000498534 SMC2O95347 1197 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 SETSIPP0DME0 302 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 HLA-EP13747 358 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 LCP1P13796 627 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 TBXAS1P24557 533 aaPredicted RBP12.54□□□□□ -0.4
CNOT4-211ENST00000498534 HOXD9P28356 352 aaPredicted RBP12.54□□□□□ -0.4
CNOT4-211ENST00000498534 HLA-FP30511 346 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 PRCPP42785 496 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 SLC11A2P49281 568 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 AFF3P51826 1226 aaKnown RBP12.54□□□□□ -0.4
CNOT4-211ENST00000498534 ZBTB16Q05516 673 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 TEAD4Q15561 434 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 HLA-BQ31612 363 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 CBWD6Q4V339 395 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 CBWD3Q5JTY5 395 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 CBWD5Q5RIA9 395 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 CHST9Q7L1S5 443 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 GLRX5Q86SX6 157 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 CACUL1Q86Y37 369 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 UNC45BQ8IWX7 931 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 AHI1Q8N157 1196 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 ZNF557Q8N988 423 aaPredicted RBP12.54□□□□□ -0.4
CNOT4-211ENST00000498534 RBBP8NLQ8NC74 664 aaPredicted RBP12.54□□□□□ -0.4
CNOT4-211ENST00000498534 SNX19Q92543 992 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 GOLGA1Q92805 767 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 CDC6Q99741 560 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 GTPBP4Q9BZE4 634 aaKnown RBP12.54□□□□□ -0.4
CNOT4-211ENST00000498534 IRX2Q9BZI1 471 aaPredicted RBP12.54□□□□□ -0.4
CNOT4-211ENST00000498534 LHX5Q9H2C1 402 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 GOLPH3LQ9H4A5 285 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 CNGB3Q9NQW8 809 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 ABCB8Q9NUT2 735 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 KIAA1522Q9P206 1035 aaPredicted RBP12.54□□□□□ -0.4
CNOT4-211ENST00000498534 ARMCX3Q9UH62 379 aaPredicted RBP12.54□□□□□ -0.4
CNOT4-211ENST00000498534 STOML2Q9UJZ1 356 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 PCOLCE2Q9UKZ9 415 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 PCDHGB2Q9Y5G2 931 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 KNL1Q8NG31 2342 aa12.54□□□□□ -0.4
CNOT4-211ENST00000498534 DNTTP04053 509 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 DLDP09622 509 aaKnown RBP12.53□□□□□ -0.4
CNOT4-211ENST00000498534 PABPC1P11940 636 aaKnown RBP12.53□□□□□ -0.4
CNOT4-211ENST00000498534 POLR2EP19388 210 aaKnown RBP12.53□□□□□ -0.4
CNOT4-211ENST00000498534 CSNK1EP49674 416 aaKnown RBP12.53□□□□□ -0.4
CNOT4-211ENST00000498534 SFSWAPQ12872 951 aaKnown RBP12.53□□□□□ -0.4
CNOT4-211ENST00000498534 LRMPQ12912 555 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 MPP7Q5T2T1 576 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 ZNF658Q5TYW1 1059 aaPredicted RBP12.53□□□□□ -0.4
CNOT4-211ENST00000498534 ANKRD40Q6AI12 368 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 LRSAM1Q6UWE0 723 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 BHLHA9Q7RTU4 235 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 ADIPOR2Q86V24 386 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 CCDC117Q8IWD4 279 aaPredicted RBP12.53□□□□□ -0.4
CNOT4-211ENST00000498534 SCML4Q8N228 414 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 RHBDD1Q8TEB9 315 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 CYB5D2Q8WUJ1 264 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 GSDMAQ96QA5 445 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 DDX50Q9BQ39 737 aaKnown RBP12.53□□□□□ -0.4
CNOT4-211ENST00000498534 BTBD1Q9H0C5 482 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 TMEM245Q9H330 911 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 IL21RQ9HBE5 538 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 HOOK1Q9UJC3 728 aaKnown RBP12.53□□□□□ -0.4
CNOT4-211ENST00000498534 GGA2Q9UJY4 613 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 LHX6Q9UPM6 363 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 NCKAP1Q9Y2A7 1128 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 SPEGQ15772 3267 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 WDFY3Q8IZQ1 3526 aa12.53□□□□□ -0.4
CNOT4-211ENST00000498534 A0A1B0GVT2 93 aa12.52□□□□□ -0.41
CNOT4-211ENST00000498534 O00370 1275 aa12.52□□□□□ -0.41
CNOT4-211ENST00000498534 FLRT2O43155 660 aa12.52□□□□□ -0.41
CNOT4-211ENST00000498534 IRAK2O43187 625 aa12.52□□□□□ -0.41
CNOT4-211ENST00000498534 CBFA2T3O75081 653 aa12.52□□□□□ -0.41
CNOT4-211ENST00000498534 SEMA4FO95754 770 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms