RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 PPP3CAQ08209 521 aa14.26□□□□□ -0.13
SHANK2-217ENST00000498519 FOXD4L6Q3SYB3 417 aaPredicted RBP14.26□□□□□ -0.13
SHANK2-217ENST00000498519 FOXD4L3Q6VB84 417 aaPredicted RBP14.26□□□□□ -0.13
SHANK2-217ENST00000498519 CACUL1Q86Y37 369 aa14.26□□□□□ -0.13
SHANK2-217ENST00000498519 FMNL3Q8IVF7 1028 aa14.26□□□□□ -0.13
SHANK2-217ENST00000498519 SCUBE3Q8IX30 993 aa14.26□□□□□ -0.13
SHANK2-217ENST00000498519 SIX6OS1Q8N1H7 587 aa14.26□□□□□ -0.13
SHANK2-217ENST00000498519 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.26□□□□□ -0.13
SHANK2-217ENST00000498519 HNRNPLLQ8WVV9 542 aaKnown RBP14.26□□□□□ -0.13
SHANK2-217ENST00000498519 SORCS1Q8WY21 1168 aa14.26□□□□□ -0.13
SHANK2-217ENST00000498519 C6orf106Q9H6K1 298 aaPredicted RBP14.26□□□□□ -0.13
SHANK2-217ENST00000498519 MMRN2Q9H8L6 949 aa14.26□□□□□ -0.13
SHANK2-217ENST00000498519 TM9SF3Q9HD45 589 aa14.26□□□□□ -0.13
SHANK2-217ENST00000498519 ABCC13Q9NSE7 274 aa14.26□□□□□ -0.13
SHANK2-217ENST00000498519 RAB20Q9NX57 234 aa14.26□□□□□ -0.13
SHANK2-217ENST00000498519 TPX2Q9ULW0 747 aaKnown RBP14.26□□□□□ -0.13
SHANK2-217ENST00000498519 NBEAQ8NFP9 2946 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 TYW5A2RUC4 315 aaKnown RBP14.25□□□□□ -0.13
SHANK2-217ENST00000498519 XPO1O14980 1071 aaKnown RBP14.25□□□□□ -0.13
SHANK2-217ENST00000498519 TSPAN3O60637 253 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 POLR2EP19388 210 aaKnown RBP14.25□□□□□ -0.13
SHANK2-217ENST00000498519 HOXD9P28356 352 aaPredicted RBP14.25□□□□□ -0.13
SHANK2-217ENST00000498519 HLA-FP30511 346 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 ACSL1P33121 698 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 SLC11A2P49281 568 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 MXI1P50539 228 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 C21orf59P57076 290 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 ST8SIA6P61647 398 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 BNC1Q01954 994 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 SMAD1Q15797 465 aaKnown RBP14.25□□□□□ -0.13
SHANK2-217ENST00000498519 SOWAHCQ53LP3 525 aaPredicted RBP14.25□□□□□ -0.13
SHANK2-217ENST00000498519 FOXD4L5Q5VV16 416 aaPredicted RBP14.25□□□□□ -0.13
SHANK2-217ENST00000498519 TMEM215Q68D42 235 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 ZNF776Q68DI1 518 aaPredicted RBP14.25□□□□□ -0.13
SHANK2-217ENST00000498519 USP30Q70CQ3 517 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 CHST9Q7L1S5 443 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 TMPRSS12Q86WS5 348 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 CCDC117Q8IWD4 279 aaPredicted RBP14.25□□□□□ -0.13
SHANK2-217ENST00000498519 UNC45BQ8IWX7 931 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 GUF1Q8N442 669 aaKnown RBP14.25□□□□□ -0.13
SHANK2-217ENST00000498519 SLC4A11Q8NBS3 891 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 FOXD4L4Q8WXT5 416 aaPredicted RBP14.25□□□□□ -0.13
SHANK2-217ENST00000498519 P2RY11Q96G91 374 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 DDX50Q9BQ39 737 aaKnown RBP14.25□□□□□ -0.13
SHANK2-217ENST00000498519 ACE2Q9BYF1 805 aaPredicted RBP14.25□□□□□ -0.13
SHANK2-217ENST00000498519 ABCB8Q9NUT2 735 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 TOR4AQ9NXH8 423 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 GGA2Q9UJY4 613 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 KIAA1257Q9ULG3 409 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 CLEC4EQ9ULY5 219 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.25□□□□□ -0.13
SHANK2-217ENST00000498519 SNX11Q9Y5W9 270 aa14.25□□□□□ -0.13
SHANK2-217ENST00000498519 TRABD2BA6NFA1 517 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 GOLGA8CPA6NN73 597 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 YKT6O15498 198 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 PAPSS1O43252 624 aaPredicted RBP14.24□□□□□ -0.13
SHANK2-217ENST00000498519 FSBPO95073 299 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 EPB41P11171 864 aaKnown RBP14.24□□□□□ -0.13
SHANK2-217ENST00000498519 PABPC1P11940 636 aaKnown RBP14.24□□□□□ -0.13
SHANK2-217ENST00000498519 HLA-EP13747 358 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 PFKFB1P16118 471 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 HNF1BP35680 557 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 RAD23BP54727 409 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 MCCD1P59942 119 aaPredicted RBP14.24□□□□□ -0.13
SHANK2-217ENST00000498519 RACK1P63244 317 aaKnown RBP14.24□□□□□ -0.13
SHANK2-217ENST00000498519 BST2Q10589 180 aaKnown RBP14.24□□□□□ -0.13
SHANK2-217ENST00000498519 EDRF1Q3B7T1 1238 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 SGO2Q562F6 1265 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 NUGGCQ68CJ6 796 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 GANCQ8TET4 914 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 SNX21Q969T3 373 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 BIRC7Q96CA5 298 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 ULBP1Q9BZM6 244 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 CNGB3Q9NQW8 809 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 FTSJ1Q9UET6 329 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 PCDHGA1Q9Y5H4 931 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 PI4KAP42356 2102 aa14.24□□□□□ -0.13
SHANK2-217ENST00000498519 SMG1Q96Q15 3661 aaKnown RBP14.23□□□□□ -0.13
SHANK2-217ENST00000498519 A0A087WV48 116 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 CETN3O15182 167 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 VILLO15195 856 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 C1SP09871 688 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 SETSIPP0DME0 302 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 CTSKP43235 329 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 SYKP43405 635 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 RPS14P62263 151 aaKnown RBP14.23□□□□□ -0.13
SHANK2-217ENST00000498519 CYP4F3Q08477 520 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 PTPRNQ16849 979 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 BSPRYQ5W0U4 402 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 MBLAC2Q68D91 279 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 KIAA0907Q7Z7F0 614 aaPredicted RBP14.23□□□□□ -0.13
SHANK2-217ENST00000498519 ADIPOR2Q86V24 386 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 HSCBQ8IWL3 235 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 SCML4Q8N228 414 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 KDM1BQ8NB78 822 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 CYB5D2Q8WUJ1 264 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 KCTD13Q8WZ19 329 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 LRIG1Q96JA1 1093 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 PRSS16Q9NQE7 514 aa14.23□□□□□ -0.13
SHANK2-217ENST00000498519 A0A1B0GVL5 298 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms