RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 PMS2CLQ68D20 193 aa19.1■□□□□ 0.65
HOXD11-202ENST00000498438 RNF43Q68DV7 783 aa19.1■□□□□ 0.65
HOXD11-202ENST00000498438 PRR23CQ6ZRP0 262 aa19.1■□□□□ 0.65
HOXD11-202ENST00000498438 NOP9Q86U38 636 aaKnown RBP19.1■□□□□ 0.65
HOXD11-202ENST00000498438 DEFB106AQ8N104 65 aa19.1■□□□□ 0.65
HOXD11-202ENST00000498438 AOPEPQ8N6M6 819 aa19.1■□□□□ 0.65
HOXD11-202ENST00000498438 TMEM35BQ8NCS4 154 aa19.1■□□□□ 0.65
HOXD11-202ENST00000498438 ANKRD20A12PQ8NF67 263 aa19.1■□□□□ 0.65
HOXD11-202ENST00000498438 WFDC5Q8TCV5 224 aa19.1■□□□□ 0.65
HOXD11-202ENST00000498438 SORCS1Q8WY21 1168 aa19.1■□□□□ 0.65
HOXD11-202ENST00000498438 DDX1Q92499 740 aaKnown RBP19.1■□□□□ 0.65
HOXD11-202ENST00000498438 DDX50Q9BQ39 737 aaKnown RBP19.1■□□□□ 0.65
HOXD11-202ENST00000498438 IRX2Q9BZI1 471 aaPredicted RBP19.1■□□□□ 0.65
HOXD11-202ENST00000498438 NUCKS1Q9H1E3 243 aaKnown RBP19.1■□□□□ 0.65
HOXD11-202ENST00000498438 FAM204AQ9H8W3 233 aa19.1■□□□□ 0.65
HOXD11-202ENST00000498438 ABCB8Q9NUT2 735 aa19.1■□□□□ 0.65
HOXD11-202ENST00000498438 CALCOCO1Q9P1Z2 691 aa19.1■□□□□ 0.65
HOXD11-202ENST00000498438 LIMA1Q9UHB6 759 aaKnown RBP19.1■□□□□ 0.65
HOXD11-202ENST00000498438 XPO7Q9UIA9 1087 aaKnown RBP19.1■□□□□ 0.65
HOXD11-202ENST00000498438 SIK3Q9Y2K2 1263 aa19.1■□□□□ 0.65
HOXD11-202ENST00000498438 STON1Q9Y6Q2 735 aa19.1■□□□□ 0.65
HOXD11-202ENST00000498438 MUC22E2RYF6 1773 aaPredicted RBP19.09■□□□□ 0.65
HOXD11-202ENST00000498438 CKAP5Q14008 2032 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 FAM170AA1A519 330 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 LGALS16A8MUM7 142 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 NPC1O15118 1278 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 EPHB6O15197 1021 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 DAB1O75553 588 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 ZNF18P17022 549 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 NDUFV2P19404 249 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 CDH5P33151 784 aaPredicted RBP19.09■□□□□ 0.65
HOXD11-202ENST00000498438 IL12RB1P42701 662 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 SNX16P57768 344 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 POLR2FP61218 127 aaKnown RBP19.09■□□□□ 0.65
HOXD11-202ENST00000498438 CDK17Q00537 523 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 RSPO4Q2I0M5 234 aaPredicted RBP19.09■□□□□ 0.65
HOXD11-202ENST00000498438 MAP7D1Q3KQU3 841 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 MPP7Q5T2T1 576 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 CAVIN1Q6NZI2 390 aaKnown RBP19.09■□□□□ 0.65
HOXD11-202ENST00000498438 SLC26A9Q7LBE3 791 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 FRMD1Q8N878 549 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.09■□□□□ 0.65
HOXD11-202ENST00000498438 HJURPQ8NCD3 748 aaPredicted RBP19.09■□□□□ 0.65
HOXD11-202ENST00000498438 EPS8L1Q8TE68 723 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 WFIKKN2Q8TEU8 576 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 MYEOVQ96EZ4 313 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 HSD3B7Q9H2F3 369 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 STIM2Q9P246 746 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 GGA2Q9UJY4 613 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 PCDHGA5Q9Y5G8 931 aa19.09■□□□□ 0.65
HOXD11-202ENST00000498438 SYNJ2BP-COX16A0A087WUM0 186 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 TYW5A2RUC4 315 aaKnown RBP19.08■□□□□ 0.64
HOXD11-202ENST00000498438 PRR5-ARHGAP8B1AHC4 643 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 ZBTB24O43167 697 aaPredicted RBP19.08■□□□□ 0.64
HOXD11-202ENST00000498438 GFPT2O94808 682 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 CDK11BP21127 795 aaKnown RBP19.08■□□□□ 0.64
HOXD11-202ENST00000498438 MPLP40238 635 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 RPS24P62847 133 aaKnown RBP19.08■□□□□ 0.64
HOXD11-202ENST00000498438 ARHGAP8P85298 464 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 SLC6A3Q01959 620 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 EIF4EBP2Q13542 120 aaPredicted RBP19.08■□□□□ 0.64
HOXD11-202ENST00000498438 ENPP2Q13822 863 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 ZNF234Q14588 700 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 STARD3Q14849 445 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 SYCP1Q15431 976 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 ANO6Q4KMQ2 910 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 MS4A13Q5J8X5 152 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 CHST9Q7L1S5 443 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 SLC6A17Q9H1V8 727 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 SMOC1Q9H4F8 434 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 NLRC4Q9NPP4 1024 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 DDIT4Q9NX09 232 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 COX16Q9P0S2 106 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 MBD1Q9UIS9 605 aaPredicted RBP19.08■□□□□ 0.64
HOXD11-202ENST00000498438 CACNA1AO00555 2505 aa19.08■□□□□ 0.64
HOXD11-202ENST00000498438 TIMM44O43615 452 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 LSM8O95777 96 aaKnown RBP19.07■□□□□ 0.64
HOXD11-202ENST00000498438 MMEP08473 750 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 PABPC1P11940 636 aaKnown RBP19.07■□□□□ 0.64
HOXD11-202ENST00000498438 JAM2P57087 298 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 CREB5Q02930 508 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 ARID5AQ03989 594 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 BYSLQ13895 437 aaKnown RBP19.07■□□□□ 0.64
HOXD11-202ENST00000498438 SF3A2Q15428 464 aaKnown RBP19.07■□□□□ 0.64
HOXD11-202ENST00000498438 PLA2G2CQ5R387 149 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 RAP1GAP2Q684P5 730 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 APTXQ7Z2E3 356 aaKnown RBP19.07■□□□□ 0.64
HOXD11-202ENST00000498438 KIAA0907Q7Z7F0 614 aaPredicted RBP19.07■□□□□ 0.64
HOXD11-202ENST00000498438 ADIPOR2Q86V24 386 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 CHSY1Q86X52 802 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 ZDHHC17Q8IUH5 632 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 MFN1Q8IWA4 741 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 AHI1Q8N157 1196 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 ZNF397Q8NF99 534 aaPredicted RBP19.07■□□□□ 0.64
HOXD11-202ENST00000498438 SLC20A1Q8WUM9 679 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 BTN2A3PQ96KV6 586 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 DLL3Q9NYJ7 618 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 CDV3Q9UKY7 258 aaKnown RBP19.07■□□□□ 0.64
HOXD11-202ENST00000498438 DAAM1Q9Y4D1 1078 aa19.07■□□□□ 0.64
HOXD11-202ENST00000498438 GON4LQ3T8J9 2241 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms