RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 ZBTB24O43167 697 aaPredicted RBP23.53■■□□□ 1.36
CDKN2A-208ENST00000498124 CYBBP04839 570 aa23.53■■□□□ 1.36
CDKN2A-208ENST00000498124 TPM2P07951 284 aa23.53■■□□□ 1.36
CDKN2A-208ENST00000498124 STARD3Q14849 445 aa23.53■■□□□ 1.36
CDKN2A-208ENST00000498124 EIF4HQ15056 248 aaKnown RBP23.53■■□□□ 1.36
CDKN2A-208ENST00000498124 VWA3BQ502W6 1294 aa23.53■■□□□ 1.36
CDKN2A-208ENST00000498124 PMF1Q6P1K2 205 aa23.53■■□□□ 1.36
CDKN2A-208ENST00000498124 METTL3Q86U44 580 aaKnown RBP23.53■■□□□ 1.36
CDKN2A-208ENST00000498124 DHX40Q8IX18 779 aaKnown RBP23.53■■□□□ 1.36
CDKN2A-208ENST00000498124 DDI1Q8WTU0 396 aa23.53■■□□□ 1.36
CDKN2A-208ENST00000498124 NT5C1BQ96P26 610 aa23.53■■□□□ 1.36
CDKN2A-208ENST00000498124 SLC2A11Q9BYW1 496 aa23.53■■□□□ 1.36
CDKN2A-208ENST00000498124 SPEGQ15772 3267 aa23.52■■□□□ 1.36
CDKN2A-208ENST00000498124 LCP1P13796 627 aa23.52■■□□□ 1.36
CDKN2A-208ENST00000498124 CDK11BP21127 795 aaKnown RBP23.52■■□□□ 1.36
CDKN2A-208ENST00000498124 RGS7P49802 495 aa23.52■■□□□ 1.36
CDKN2A-208ENST00000498124 SGSHP51688 502 aa23.52■■□□□ 1.36
CDKN2A-208ENST00000498124 ZNF132P52740 706 aa23.52■■□□□ 1.36
CDKN2A-208ENST00000498124 COPAP53621 1224 aa23.52■■□□□ 1.36
CDKN2A-208ENST00000498124 SEMA3BQ13214 749 aa23.52■■□□□ 1.36
CDKN2A-208ENST00000498124 MSANTD2Q6P1R3 559 aa23.52■■□□□ 1.36
CDKN2A-208ENST00000498124 PIP4P1Q86T03 277 aa23.52■■□□□ 1.36
CDKN2A-208ENST00000498124 ARHGEF19Q8IW93 802 aa23.52■■□□□ 1.36
CDKN2A-208ENST00000498124 PRDM16Q9HAZ2 1276 aa23.52■■□□□ 1.36
CDKN2A-208ENST00000498124 ABCC13Q9NSE7 274 aa23.52■■□□□ 1.36
CDKN2A-208ENST00000498124 GTPBP10A4D1E9 387 aaKnown RBP23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 PIK3R2O00459 728 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 TSPAN3O60637 253 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 TOP3BO95985 862 aaKnown RBP23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 IGLV3-27P01718 113 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 NCAM1P13591 858 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 ZNF18P17022 549 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 BRD2P25440 801 aaKnown RBP23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 CD6P30203 668 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 HLA-FP30511 346 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 HARS2P49590 506 aaKnown RBP23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 IQCB1Q15051 598 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 MPPE1Q53F39 396 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 LRSAM1Q6UWE0 723 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 PPM1KQ8N3J5 372 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 EHBP1Q8NDI1 1231 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 OR2I1PQ8NGU4 316 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 CLEC4CQ8WTT0 213 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 RNF139Q8WU17 664 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 UCMAQ8WVF2 138 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 CIPCQ9C0C6 399 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 NDST4Q9H3R1 872 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 CBX8Q9HC52 389 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 WSB2Q9NYS7 404 aaPredicted RBP23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 PCDHB4Q9Y5E5 795 aa23.51■■□□□ 1.35
CDKN2A-208ENST00000498124 UPK3BL1B0FP48 263 aa23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 UPK3BL2E5RIL1 263 aa23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 M0QYV0 167 aa23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 LATS1O95835 1130 aa23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 TPM4P67936 248 aa23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 GFPT1Q06210 699 aaPredicted RBP23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 FOXC1Q12948 553 aa23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 KRT31Q15323 416 aa23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 CNGA2Q16280 664 aa23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 GBP6Q6ZN66 633 aa23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 RABEPKQ7Z6M1 372 aa23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 TOE1Q96GM8 510 aaKnown RBP23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 GTPBP2Q9BX10 602 aaKnown RBP23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 TSPY26PQ9H489 355 aa23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 ITM2CQ9NQX7 267 aa23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 TAB2Q9NYJ8 693 aa23.5■■□□□ 1.35
CDKN2A-208ENST00000498124 PCNX2A6NKB5 2137 aa23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 PES1O00541 588 aaKnown RBP23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 ARHGAP33O14559 1287 aa23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 IGLV3-19P01714 112 aa23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 SPINK2P20155 84 aa23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 TPMTP51580 245 aa23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 MIIPQ5JXC2 388 aa23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 ADGRF1Q5T601 910 aa23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 RRAGAQ7L523 313 aa23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 KIAA0907Q7Z7F0 614 aaPredicted RBP23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 TMPRSS6Q8IU80 811 aa23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 MINDY1Q8N5J2 469 aa23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 WFDC5Q8TCV5 224 aa23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 IRGQQ8WZA9 623 aa23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 KREMEN1Q96MU8 473 aa23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 TMEM121BQ9BXQ6 578 aaPredicted RBP23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 INTS2Q9H0H0 1204 aaKnown RBP23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 HSD3B7Q9H2F3 369 aa23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 LIMA1Q9UHB6 759 aaKnown RBP23.49■■□□□ 1.35
CDKN2A-208ENST00000498124 NDUFS2O75306 463 aa23.48■■□□□ 1.35
CDKN2A-208ENST00000498124 C7P10643 843 aa23.48■■□□□ 1.35
CDKN2A-208ENST00000498124 MAOBP27338 520 aa23.48■■□□□ 1.35
CDKN2A-208ENST00000498124 ZNF445P59923 1031 aa23.48■■□□□ 1.35
CDKN2A-208ENST00000498124 GCNT1Q02742 428 aa23.48■■□□□ 1.35
CDKN2A-208ENST00000498124 EXOC3L4Q17RC7 722 aa23.48■■□□□ 1.35
CDKN2A-208ENST00000498124 FAM133BQ5BKY9 247 aaKnown RBP23.48■■□□□ 1.35
CDKN2A-208ENST00000498124 ADIPOR2Q86V24 386 aa23.48■■□□□ 1.35
CDKN2A-208ENST00000498124 CACUL1Q86Y37 369 aa23.48■■□□□ 1.35
CDKN2A-208ENST00000498124 GOLGA6L19H0YKK7 550 aa23.47■■□□□ 1.35
CDKN2A-208ENST00000498124 SYNCRIPO60506 623 aaKnown RBP23.47■■□□□ 1.35
CDKN2A-208ENST00000498124 GJB3O75712 270 aa23.47■■□□□ 1.35
CDKN2A-208ENST00000498124 FYNP06241 537 aa23.47■■□□□ 1.35
CDKN2A-208ENST00000498124 EPHX1P07099 455 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms