RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 PAK5Q9P286 719 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 FBXW11Q9UKB1 542 aa8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 TPX2Q9ULW0 747 aaKnown RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 MRPL42Q9Y6G3 142 aaKnown RBP8.35□□□□□ -1.07
PDZRN3-212ENST00000498048 KIF26AQ9ULI4 1882 aaPredicted RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 BCLAF3A2AJT9 711 aaKnown RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 HACD1B0YJ81 288 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 DCLK1O15075 740 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 TP73O15350 636 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 TBC1D4O60343 1298 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 ZNF189O75820 626 aaPredicted RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 STK10O94804 968 aaKnown RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 TMEM63AO94886 807 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 VNN2O95498 520 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 ACSL3O95573 720 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 MOCS2O96007 188 aaPredicted RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 APOEP02649 317 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 MYZAPP0CAP1 466 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 RARGP13631 454 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 VAV1P15498 845 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 RPL17P18621 184 aaKnown RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 ATF6P18850 670 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 ITGB8P26012 769 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 YWHAQP27348 245 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 RBL1P28749 1068 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 RPL22P35268 128 aaKnown RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 ADRA1BP35368 520 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 USP46P62068 366 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 GABPB1Q06547 395 aaPredicted RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 PPIGQ13427 754 aaKnown RBP eCLIP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 PAFAH1B3Q15102 231 aaKnown RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 HIF1AQ16665 826 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 TTMPQ5BVD1 217 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 SLC8B1Q6J4K2 584 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 PPP1R21Q6ZMI0 780 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 PDZD4Q76G19 769 aaPredicted RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 BZW1Q7L1Q6 419 aaKnown RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 TAS1R1Q7RTX1 841 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 SCD5Q86SK9 330 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 IQCKQ8N0W5 287 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 TAB3Q8N5C8 712 aaPredicted RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 CCDC33Q8N5R6 958 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 DNAJC5GQ8N7S2 189 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 FAM76AQ8TAV0 307 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 GPR152Q8TDT2 470 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 TFB1MQ8WVM0 346 aaKnown RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 CASP10Q92851 521 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 ZNF689Q96CS4 500 aaPredicted RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 TBC1D31Q96DN5 1066 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 RTP4Q96DX8 246 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 SPATA17Q96L03 361 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 FERMT1Q9BQL6 677 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 MAGEB5Q9BZ81 275 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 PHACTR1Q9C0D0 580 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 KLC2Q9H0B6 622 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 EPB41L4BQ9H329 900 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 CRISPLD1Q9H336 500 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 CENPHQ9H3R5 247 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 WDCPQ9H6R7 721 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 SAYSD1Q9NPB0 183 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 IL23AQ9NPF7 189 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 ANLNQ9NQW6 1124 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 TLR8Q9NR97 1041 aaKnown RBP8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 ETNK2Q9NVF9 386 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 ARHGEF38Q9NXL2 777 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 NINJ2Q9NZG7 142 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 PCDH10Q9P2E7 1040 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 PRKAG2Q9UGJ0 569 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 SFMBT1Q9UHJ3 866 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 YIPF1Q9Y548 306 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 SNX10Q9Y5X0 201 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 BACE2Q9Y5Z0 518 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 MYOFQ9NZM1 2061 aa8.34□□□□□ -1.07
PDZRN3-212ENST00000498048 KIAA1549LQ6ZVL6 1849 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 SMIM23A6NLE4 172 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 SLC38A8A6NNN8 435 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 HMGB1P1B2RPK0 211 aaPredicted RBP8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 FAM72CH0Y354 149 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 I6L893 689 aaPredicted RBP8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 SMAPO00193 183 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 CHADO15335 359 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 FGF10O15520 208 aaPredicted RBP8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 ADAM12O43184 909 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 LRIG2O94898 1065 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 EFEMP2O95967 443 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 IVLP07476 585 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 ERCC2P18074 760 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 DNAJB2P25686 324 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 STIP1P31948 543 aaKnown RBP8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 CCR1P32246 355 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 HTR7P34969 479 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 OR1D2P34982 312 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 CA8P35219 290 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 NRLP54845 237 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 ARL4CP56559 192 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 TBX4P57082 545 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 DSG1Q02413 1049 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 FPGSQ05932 587 aa8.33□□□□□ -1.08
PDZRN3-212ENST00000498048 EFEMP1Q12805 493 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms