RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 TTMPQ5BVD1 217 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 SYCP2LQ5T4T6 812 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 MSANTD2Q6P1R3 559 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 TP53INP2Q8IXH6 220 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 PPIL6Q8IXY8 311 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 CCDC110Q8TBZ0 833 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 TFB1MQ8WVM0 346 aaKnown RBP18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 RBM15Q96T37 977 aaKnown RBP eCLIP18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 LRRC4CQ9HCJ2 640 aa18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 TLR8Q9NR97 1041 aaKnown RBP18.38■□□□□ 0.53
CHRNA4-206ENST00000498043 PAGE1O75459 146 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 SEC24AO95486 1093 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 SRGAP2BP0DMP2 458 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 VAV1P15498 845 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 FPGSQ05932 587 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 PPIGQ13427 754 aaKnown RBP eCLIP18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 RASIP1Q5U651 963 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 HEATR6Q6AI08 1181 aaKnown RBP18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 PCGF5Q86SE9 256 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 VPS52Q8N1B4 723 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 NPWQ8N729 165 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 PRDM16Q9HAZ2 1276 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 AFF4Q9UHB7 1163 aaKnown RBP18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 XPO7Q9UIA9 1087 aaKnown RBP18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 TCRBV7S3A2A0A539 114 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 GOLGA8KD6RF30 607 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 NDC80O14777 642 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 TMEM63AO94886 807 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 TBX18O95935 607 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 NUDT17P0C025 328 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 CAPN2P17655 700 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 FAXCQ5TGI0 409 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 RWDD4Q6NW29 188 aaKnown RBP18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 TRMT10CQ7L0Y3 403 aaKnown RBP18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 DDX53Q86TM3 631 aaKnown RBP18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 MIB1Q86YT6 1006 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 NAT8LQ8N9F0 302 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 CENPHQ9H3R5 247 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 CXXC1Q9P0U4 656 aaPredicted RBP18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 PAK5Q9P286 719 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 TLR6Q9Y2C9 796 aa18.37■□□□□ 0.53
CHRNA4-206ENST00000498043 GOLGA6L10A6NI86 522 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 GJB5O95377 273 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 FGBP02675 491 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 HCAR3P49019 387 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 AP1B1Q10567 949 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 PPP2R5DQ14738 602 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 C10orf120Q5SQS8 335 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 KCTD16Q68DU8 428 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 BZW1Q7L1Q6 419 aaKnown RBP18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 ZNF461Q8TAF7 563 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 C9orf72Q96LT7 481 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 OSBPL2Q9H1P3 480 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 CYP4F11Q9HBI6 524 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 SAYSD1Q9NPB0 183 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 RAB6BQ9NRW1 208 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 CLIC5Q9NZA1 410 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 NEU3Q9UQ49 428 aa18.36■□□□□ 0.53
CHRNA4-206ENST00000498043 PPM1AP35813 382 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 TUFMP49411 452 aaKnown RBP18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 PSEN1P49768 467 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 KYNUQ16719 465 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 HP1BP3Q5SSJ5 553 aaPredicted RBP18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 HOOK3Q86VS8 718 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 C7orf61Q8IZ16 206 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 CCNYQ8ND76 341 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 FCRL2Q96LA5 508 aaPredicted RBP18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 HAPLN3Q96S86 360 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 ZBED2Q9BTP6 218 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 FOXP3Q9BZS1 431 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 CCSER2Q9H7U1 834 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 NINJ2Q9NZG7 142 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 GOLGA6CA6NDK9 693 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 HACD1B0YJ81 288 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 PPP1R12AO14974 1030 aaPredicted RBP18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 BANF1O75531 89 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 MYZAPP0CAP1 466 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 GOLGA6DP0CG33 693 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 CA8P35219 290 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 ZNF135P52742 658 aaPredicted RBP18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 TBX4P57082 545 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 MTM1Q13496 603 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 FASTKD3Q14CZ7 662 aaKnown RBP18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 PDK1Q15118 436 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 PRKD1Q15139 912 aaPredicted RBP18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 HIF1AQ16665 826 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 KRT71Q3SY84 523 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 HTR3CQ8WXA8 447 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 PRDM12Q9H4Q4 367 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 GOLGA6AQ9NYA3 693 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 YIPF1Q9Y548 306 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 PCDHB12Q9Y5F1 795 aa18.35■□□□□ 0.53
CHRNA4-206ENST00000498043 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 KCNU1A8MYU2 1149 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 ABLIM3O94929 683 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 SH2D3CQ8N5H7 860 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 TTLL2Q9BWV7 592 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 CEP41Q9BYV8 373 aa18.34■□□□□ 0.53
CHRNA4-206ENST00000498043 OLA1Q9NTK5 396 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms