RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 TOP1MTQ969P6 601 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 ZNF689Q96CS4 500 aaPredicted RBP6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 HVCN1Q96D96 273 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 VMP1Q96GC9 406 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 TMX3Q96JJ7 454 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 MSLNLQ96KJ4 702 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 C16orf92Q96LL3 132 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 SAMD11Q96NU1 681 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 CDX2Q99626 313 aaPredicted RBP6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 RAD9AQ99638 391 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 EIF2AQ9BY44 585 aaKnown RBP6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 IFIH1Q9BYX4 1025 aaKnown RBP6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 ZMAT3Q9HA38 289 aaKnown RBP6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 OBP2BQ9NPH6 170 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 SLAMF8Q9P0V8 285 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 NFKBIL1Q9UBC1 381 aaPredicted RBP6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 DPP7Q9UHL4 492 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 TMEM59LQ9UK28 342 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 KCNJ14Q9UNX9 436 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 TRPV2Q9Y5S1 764 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 CDY2AQ9Y6F7 541 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 ZNF318Q5VUA4 2279 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 ZMYM2Q9UBW7 1377 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 MYO10Q9HD67 2058 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 LGALS16A8MUM7 142 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 BTBD18B2RXH4 712 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 C5orf67F2Z3F1 127 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 KCNK3O14649 394 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 NPC1O15118 1278 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 LPXNO60711 386 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 DKC1O60832 514 aaKnown RBP eCLIP6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 CLASP2O75122 1294 aaKnown RBP6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 GPR32O75388 356 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 PAPLNO95428 1278 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 LPLP06858 475 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 SYPP08247 313 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 TMEM253P0C7T8 217 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 BRAFP15056 766 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 ALOX15P16050 662 aaPredicted RBP6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 KLRC1P26715 233 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 MARK3P27448 753 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 SLC7A1P30825 629 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 STAT5AP42229 794 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 NPTX2P47972 431 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 MAN2A2P49641 1150 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 PAPOLAP51003 745 aaKnown RBP6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 PSMC5P62195 406 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 VAMP2P63027 116 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 SP4Q02446 784 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 TAP1Q03518 808 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 MALLQ13021 153 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 SPIDRQ14159 915 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 C3orf36Q3SXR2 165 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 FAM205BPQ63HN1 556 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 JMJD6Q6NYC1 403 aaPredicted RBP6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 PIK3AP1Q6ZUJ8 805 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 BEND5Q7L4P6 421 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 ENOSF1Q7L5Y1 443 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 DEFB128Q7Z7B8 93 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 TTC7BQ86TV6 843 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 ZNF410Q86VK4 478 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 C4orf32Q8N8J7 132 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 ATP11CQ8NB49 1132 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 SPPL3Q8TCT6 385 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 DNAJB3Q8WWF6 145 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 RSAD2Q8WXG1 361 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 LINC01599Q8WXQ3 324 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 KCNN1Q92952 543 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 MAELQ96JY0 434 aaKnown RBP6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 HSD17B14Q9BPX1 270 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 SLC12A9Q9BXP2 914 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 FOXP3Q9BZS1 431 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 CDIP1Q9H305 208 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 ADAMTS10Q9H324 1103 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 DHX33Q9H6R0 707 aaKnown RBP6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 AGO3Q9H9G7 860 aaKnown RBP6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 ERVK-5Q9HDB9 667 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 SERHLQ9NQF3 203 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 ARGLU1Q9NWB6 273 aaPredicted RBP6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 CTNND2Q9UQB3 1225 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 INSL6Q9Y581 213 aa6.32□□□□□ -1.4
TMEM39A-212ENST00000497993 C2orf16Q68DN1 1984 aa6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 LINC01553A4QN01 128 aa6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 GRXCR1A8MXD5 290 aa6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 KIF28PB7ZC32 967 aa6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 TISP43B9A030 160 aa6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 B9A039 149 aa6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 LAD1O00515 517 aa6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 MAN2B1O00754 1011 aa6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 MAFO75444 373 aaPredicted RBP6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 ZNF205O95201 554 aa6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 BAG2O95816 211 aa6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 AMHP03971 560 aa6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 CA3P07451 260 aa6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 XRCC6P12956 609 aaKnown RBP eCLIP6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 VAV1P15498 845 aa6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 JUNBP17275 347 aaPredicted RBP6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 BCL6P41182 706 aa6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 PRPHP41219 470 aa6.31□□□□□ -1.4
TMEM39A-212ENST00000497993 AFMP43652 599 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms