RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 NUGGCQ68CJ6 796 aa16.6■□□□□ 0.25
CTDSP1-214ENST00000497677 RNF43Q68DV7 783 aa16.6■□□□□ 0.25
CTDSP1-214ENST00000497677 NADSYN1Q6IA69 706 aa16.6■□□□□ 0.25
CTDSP1-214ENST00000497677 FAM183BPQ6ZVS7 135 aa16.6■□□□□ 0.25
CTDSP1-214ENST00000497677 CACNA2D4Q7Z3S7 1137 aa16.6■□□□□ 0.25
CTDSP1-214ENST00000497677 UNC45BQ8IWX7 931 aa16.6■□□□□ 0.25
CTDSP1-214ENST00000497677 DEFB106AQ8N104 65 aa16.6■□□□□ 0.25
CTDSP1-214ENST00000497677 TMEM35BQ8NCS4 154 aa16.6■□□□□ 0.25
CTDSP1-214ENST00000497677 SLC20A1Q8WUM9 679 aa16.6■□□□□ 0.25
CTDSP1-214ENST00000497677 SERPINB11Q96P15 392 aa16.6■□□□□ 0.25
CTDSP1-214ENST00000497677 TRIM62Q9BVG3 475 aa16.6■□□□□ 0.25
CTDSP1-214ENST00000497677 ZDHHC4Q9NPG8 344 aa16.6■□□□□ 0.25
CTDSP1-214ENST00000497677 SPTLC3Q9NUV7 552 aa16.6■□□□□ 0.25
CTDSP1-214ENST00000497677 EBF1Q9UH73 591 aa16.6■□□□□ 0.25
CTDSP1-214ENST00000497677 PYCARDQ9ULZ3 195 aa16.6■□□□□ 0.25
CTDSP1-214ENST00000497677 GOLGA6L9A6NEM1 432 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 CAPN9O14815 690 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 IRAK2O43187 625 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 ZSCAN12O43309 604 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 ACSL4O60488 711 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 TSPAN3O60637 253 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 TRUB2O95900 331 aaKnown RBP16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 HOXD9P28356 352 aaPredicted RBP16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 SLC6A4P31645 630 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 CNR2P34972 360 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 SGSHP51688 502 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 SLC6A3Q01959 620 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 MPPE1Q53F39 396 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 DCAF6Q58WW2 860 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 OR6B2Q6IFH4 312 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 SLC26A9Q7LBE3 791 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 TMEM139Q8IV31 216 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 TMA16Q96EY4 203 aaKnown RBP16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 MYEOVQ96EZ4 313 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 XPO7Q9UIA9 1087 aaKnown RBP16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 CEP83Q9Y592 693 aa16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 EP300Q09472 2414 aaPredicted RBP16.59■□□□□ 0.25
CTDSP1-214ENST00000497677 HSF2BPO75031 334 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 GRAP2O75791 330 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 APBB3O95704 486 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 LSM8O95777 96 aaKnown RBP16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 TUBB4AP04350 444 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 CYBBP04839 570 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 STAT1P42224 750 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 SLC11A2P49281 568 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 SNX16P57768 344 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 NOMO3P69849 1222 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 FMO1Q01740 532 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 CDR2Q01850 454 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 GEN1Q17RS7 908 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 ZC3H12AQ5D1E8 599 aaKnown RBP16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 PIK3R6Q5UE93 754 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 EGFLAMQ63HQ2 1017 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 RFWD3Q6PCD5 774 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 NUDT18Q6ZVK8 323 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 RASSF3Q86WH2 238 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 ZNF677Q86XU0 584 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 ZDHHC17Q8IUH5 632 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 ZNF513Q8N8E2 541 aaPredicted RBP16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 DDI1Q8WTU0 396 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 C18orf8Q96DM3 657 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 ACOX2Q99424 681 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 SLC2A11Q9BYW1 496 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 PDCL3Q9H2J4 239 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 CD248Q9HCU0 757 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 SMG5Q9UPR3 1016 aaKnown RBP16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 FANCMQ8IYD8 2048 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 ATG2BQ96BY7 2078 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 OTOGLQ3ZCN5 2332 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 FAM186AA6NE01 2351 aa16.58■□□□□ 0.24
CTDSP1-214ENST00000497677 KCNU1A8MYU2 1149 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 AXIN1O15169 862 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 CYP1A1P04798 512 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 SCNN1AP37088 669 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 DGKEP52429 567 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 EOGTQ5NDL2 527 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 MPP7Q5T2T1 576 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 NAA35Q5VZE5 725 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 TMEM215Q68D42 235 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 ERICH1Q86X53 443 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 XYLT1Q86Y38 959 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 CCDC170Q8IYT3 715 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 TSTD1Q8NFU3 115 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 IPO4Q8TEX9 1081 aaKnown RBP16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 CPA5Q8WXQ8 436 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 SPAG5Q96R06 1193 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 PCDHB18PQ96TA0 734 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 ADAM33Q9BZ11 813 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 IRX2Q9BZI1 471 aaPredicted RBP16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 CALCOCO1Q9P1Z2 691 aa16.57■□□□□ 0.24
CTDSP1-214ENST00000497677 A0A1W2PQF6 199 aa16.56■□□□□ 0.24
CTDSP1-214ENST00000497677 FAM170AA1A519 330 aa16.56■□□□□ 0.24
CTDSP1-214ENST00000497677 HLA-FP30511 346 aa16.56■□□□□ 0.24
CTDSP1-214ENST00000497677 SIM2Q14190 667 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-214ENST00000497677 C2CD6Q53TS8 623 aa16.56■□□□□ 0.24
CTDSP1-214ENST00000497677 OTUD1Q5VV17 481 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-214ENST00000497677 KIAA0907Q7Z7F0 614 aaPredicted RBP16.56■□□□□ 0.24
CTDSP1-214ENST00000497677 DCLK2Q8N568 766 aa16.56■□□□□ 0.24
CTDSP1-214ENST00000497677 GAB3Q8WWW8 586 aa16.56■□□□□ 0.24
CTDSP1-214ENST00000497677 RUBCNQ92622 972 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms