RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 CACNG3O60359 315 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 CYP1A2P05177 515 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 TYRP14679 529 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 EIF2DP41214 584 aaKnown RBP16.81■□□□□ 0.28
FAM3A-220ENST00000497506 MESP2Q0VG99 397 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 CDO1Q16878 200 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 MPPE1Q53F39 396 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 PIK3R6Q5UE93 754 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 FSTL4Q6MZW2 842 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 SND1Q7KZF4 910 aaKnown RBP eCLIP16.81■□□□□ 0.28
FAM3A-220ENST00000497506 STRADAQ7RTN6 431 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 PHTF2Q8N3S3 785 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 NAT16Q8N8M0 369 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 TMEM105Q8N8V8 129 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 SPC24Q8NBT2 197 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 BHMTQ93088 406 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 CLDN23Q96B33 292 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 ARHGEF26Q96DR7 871 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 MYEOVQ96EZ4 313 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 PRMT1Q99873 361 aaKnown RBP16.81■□□□□ 0.28
FAM3A-220ENST00000497506 CNPY3Q9BT09 278 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 PACSIN1Q9BY11 444 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 IRX2Q9BZI1 471 aaPredicted RBP16.81■□□□□ 0.28
FAM3A-220ENST00000497506 TRIM7Q9C029 511 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 WDCPQ9H6R7 721 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 GRPEL1Q9HAV7 217 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 PLK2Q9NYY3 685 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 DLGAP2Q9P1A6 1054 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 SLC12A6Q9UHW9 1150 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 SCINQ9Y6U3 715 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 KMT2EQ8IZD2 1858 aa16.81■□□□□ 0.28
FAM3A-220ENST00000497506 ANKRD62A6NC57 917 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 GOLGA6L3A6NEY3 463 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 CCP110O43303 1012 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 TULP3O75386 442 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 PAGE1O75459 146 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 CYBBP04839 570 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 CHRNB1P11230 501 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 TACR2P21452 398 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 SGSHP51688 502 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 HDAC4P56524 1084 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 ZNF252P-AS1Q0IIN9 211 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 MTA1Q13330 715 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 CCINQ13939 588 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 MS4A13Q5J8X5 152 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 RAP1GAP2Q684P5 730 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 FAM131BQ86XD5 332 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 DDI1Q8WTU0 396 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 FAM172AQ8WUF8 416 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 EZH1Q92800 747 aaPredicted RBP16.8■□□□□ 0.28
FAM3A-220ENST00000497506 TMA16Q96EY4 203 aaKnown RBP16.8■□□□□ 0.28
FAM3A-220ENST00000497506 PRICKLE1Q96MT3 831 aaPredicted RBP16.8■□□□□ 0.28
FAM3A-220ENST00000497506 DDX50Q9BQ39 737 aaKnown RBP16.8■□□□□ 0.28
FAM3A-220ENST00000497506 TKTL2Q9H0I9 626 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 MRPL47Q9HD33 250 aaKnown RBP16.8■□□□□ 0.28
FAM3A-220ENST00000497506 TMPRSS4Q9NRS4 437 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 FBXO10Q9UK96 956 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 PAXBP1Q9Y5B6 917 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 ZNF318Q5VUA4 2279 aa16.8■□□□□ 0.28
FAM3A-220ENST00000497506 TRIM24O15164 1050 aa16.79■□□□□ 0.28
FAM3A-220ENST00000497506 EGFP01133 1207 aa16.79■□□□□ 0.28
FAM3A-220ENST00000497506 DCNP07585 359 aaKnown RBP16.79■□□□□ 0.28
FAM3A-220ENST00000497506 H2AFZP0C0S5 128 aa16.79■□□□□ 0.28
FAM3A-220ENST00000497506 CISD3P0C7P0 127 aa16.79■□□□□ 0.28
FAM3A-220ENST00000497506 HOXD9P28356 352 aaPredicted RBP16.79■□□□□ 0.28
FAM3A-220ENST00000497506 AVPR2P30518 371 aa16.79■□□□□ 0.28
FAM3A-220ENST00000497506 GRSF1Q12849 480 aaKnown RBP eCLIP16.79■□□□□ 0.28
FAM3A-220ENST00000497506 RNF43Q68DV7 783 aa16.79■□□□□ 0.28
FAM3A-220ENST00000497506 H2AFVQ71UI9 128 aa16.79■□□□□ 0.28
FAM3A-220ENST00000497506 CHSY1Q86X52 802 aa16.79■□□□□ 0.28
FAM3A-220ENST00000497506 SUGP1Q8IWZ8 645 aaKnown RBP16.79■□□□□ 0.28
FAM3A-220ENST00000497506 EXOC4Q96A65 974 aa16.79■□□□□ 0.28
FAM3A-220ENST00000497506 XPO6Q96QU8 1125 aaKnown RBP16.79■□□□□ 0.28
FAM3A-220ENST00000497506 PNKPQ96T60 521 aa16.79■□□□□ 0.28
FAM3A-220ENST00000497506 LMAN1LQ9HAT1 526 aa16.79■□□□□ 0.28
FAM3A-220ENST00000497506 RBM12Q9NTZ6 932 aaKnown RBP16.79■□□□□ 0.28
FAM3A-220ENST00000497506 DEC1Q9P2X7 70 aa16.79■□□□□ 0.28
FAM3A-220ENST00000497506 CLEC4EQ9ULY5 219 aa16.79■□□□□ 0.28
FAM3A-220ENST00000497506 HS3ST4Q9Y661 456 aa16.79■□□□□ 0.28
FAM3A-220ENST00000497506 A0A0A0MRY4 1105 aa16.78■□□□□ 0.28
FAM3A-220ENST00000497506 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.78■□□□□ 0.28
FAM3A-220ENST00000497506 NCAM2O15394 837 aa16.78■□□□□ 0.28
FAM3A-220ENST00000497506 LCA5LO95447 670 aa16.78■□□□□ 0.28
FAM3A-220ENST00000497506 DRD1P21728 446 aa16.78■□□□□ 0.28
FAM3A-220ENST00000497506 RPS24P62847 133 aaKnown RBP16.78■□□□□ 0.28
FAM3A-220ENST00000497506 DGKKQ5KSL6 1271 aa16.78■□□□□ 0.28
FAM3A-220ENST00000497506 MPP7Q5T2T1 576 aa16.78■□□□□ 0.28
FAM3A-220ENST00000497506 TMEM139Q8IV31 216 aa16.78■□□□□ 0.28
FAM3A-220ENST00000497506 SFTPA1Q8IWL2 248 aa16.78■□□□□ 0.28
FAM3A-220ENST00000497506 CCDC170Q8IYT3 715 aa16.78■□□□□ 0.28
FAM3A-220ENST00000497506 LGI2Q8N0V4 545 aa16.78■□□□□ 0.28
FAM3A-220ENST00000497506 FNIP1Q8TF40 1166 aa16.78■□□□□ 0.28
FAM3A-220ENST00000497506 ARHGEF4Q9NR80 690 aa16.78■□□□□ 0.28
FAM3A-220ENST00000497506 DNAJC17Q9NVM6 304 aaKnown RBP16.78■□□□□ 0.28
FAM3A-220ENST00000497506 ATG2BQ96BY7 2078 aa16.77■□□□□ 0.28
FAM3A-220ENST00000497506 K7EQS6 105 aa16.77■□□□□ 0.28
FAM3A-220ENST00000497506 TBL1XO60907 577 aa16.77■□□□□ 0.28
FAM3A-220ENST00000497506 KAT7O95251 611 aa16.77■□□□□ 0.28
FAM3A-220ENST00000497506 TMEM253P0C7T8 217 aa16.77■□□□□ 0.28
FAM3A-220ENST00000497506 PSMA2P25787 234 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms