RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-223ENST00000497318 SLC8A3P57103 927 aa17.32■□□□□ 0.36
SUPT20H-223ENST00000497318 INCA1Q0VD86 236 aa17.32■□□□□ 0.36
SUPT20H-223ENST00000497318 STK38Q15208 465 aa17.32■□□□□ 0.36
SUPT20H-223ENST00000497318 E2F4Q16254 413 aa17.32■□□□□ 0.36
SUPT20H-223ENST00000497318 KCNT1Q5JUK3 1230 aa17.32■□□□□ 0.36
SUPT20H-223ENST00000497318 ZNF776Q68DI1 518 aaPredicted RBP17.32■□□□□ 0.36
SUPT20H-223ENST00000497318 USP30Q70CQ3 517 aa17.32■□□□□ 0.36
SUPT20H-223ENST00000497318 FAM217AQ8IXS0 508 aa17.32■□□□□ 0.36
SUPT20H-223ENST00000497318 SNIP1Q8TAD8 396 aaKnown RBP17.32■□□□□ 0.36
SUPT20H-223ENST00000497318 UPF2Q9HAU5 1272 aaKnown RBP17.32■□□□□ 0.36
SUPT20H-223ENST00000497318 SLC39A2Q9NP94 309 aa17.32■□□□□ 0.36
SUPT20H-223ENST00000497318 PRSS16Q9NQE7 514 aa17.32■□□□□ 0.36
SUPT20H-223ENST00000497318 PTPRQQ9UMZ3 2332 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 PVALEFA0A1B0GWK0 134 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 J3QKU1 62 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 DLDP09622 509 aaKnown RBP17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 PIK3CAP42336 1068 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 CFHR1Q03591 330 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 ILKQ13418 452 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 CUL4AQ13619 759 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 HES3Q5TGS1 186 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 SV2AQ7L0J3 742 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 CHST9Q7L1S5 443 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 GATAD2AQ86YP4 633 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 AHI1Q8N157 1196 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 TMC2Q8TDI7 906 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 CYB5D2Q8WUJ1 264 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 TMA16Q96EY4 203 aaKnown RBP17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 USP28Q96RU2 1077 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 ARID3AQ99856 593 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 UBXN6Q9BZV1 441 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 GDF3Q9NR23 364 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 FOXD4L1Q9NU39 408 aa17.31■□□□□ 0.36
SUPT20H-223ENST00000497318 TENM4Q6N022 2769 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 A0A1W2PPC4 97 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 FAM47DPA6NHR8 397 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 LRRC72A6NJI9 287 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 IGHV4-34P06331 123 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 HOXD9P28356 352 aaPredicted RBP17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 HLA-FP30511 346 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 YWHAGP61981 247 aaKnown RBP eCLIP17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 EHHADHQ08426 723 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 SLC45A4Q5BKX6 768 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 SLC9A9Q8IVB4 645 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 EID2Q8N6I1 236 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 ZNF366Q8N895 744 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 CCDC150Q8NCX0 1101 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 TMEM176AQ96HP8 235 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 HEXIM2Q96MH2 286 aaKnown RBP17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 TWNKQ96RR1 684 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 ZSCAN16Q9H4T2 348 aaPredicted RBP17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 AASDHPPTQ9NRN7 309 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 OLA1Q9NTK5 396 aaKnown RBP17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 ABCB8Q9NUT2 735 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 GGA2Q9UJY4 613 aa17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 TPX2Q9ULW0 747 aaKnown RBP17.3■□□□□ 0.36
SUPT20H-223ENST00000497318 NAV2Q8IVL1 2488 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 HLA-DRAP01903 254 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 SLFN14P0C7P3 912 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 PABPC1P11940 636 aaKnown RBP17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 POLR2EP19388 210 aaKnown RBP17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 SYT1P21579 422 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 NASPP49321 788 aaPredicted RBP17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 ACADVLP49748 655 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 ST8SIA6P61647 398 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 DNAJC3Q13217 504 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 TRIP4Q15650 581 aaPredicted RBP17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 PRAMEF14Q5SWL7 426 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 ADGRF1Q5T601 910 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 SPOPLQ6IQ16 392 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 FBXL19Q6PCT2 694 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 CACTIN-AS1Q8N1I8 211 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 ZNF557Q8N988 423 aaPredicted RBP17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 SAP25Q8TEE9 199 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 TMEM174Q8WUU8 243 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 ORAI3Q9BRQ5 295 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 BACH2Q9BYV9 841 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 PABPC3Q9H361 631 aaKnown RBP17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 DMAC2Q9NW81 257 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 FBXL12Q9NXK8 326 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 FRMD4BQ9Y2L6 1034 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 SHROOM3Q8TF72 1996 aa17.29■□□□□ 0.36
SUPT20H-223ENST00000497318 SPTLC2O15270 562 aa17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 CD58P19256 250 aa17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 CD38P28907 300 aa17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 DLG4P78352 724 aa17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 TAF1BQ53T94 588 aaPredicted RBP17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 PPP1R26Q5T8A7 1209 aaPredicted RBP17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 MBLAC2Q68D91 279 aa17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 ADIPOR2Q86V24 386 aa17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 OXR1Q8N573 874 aa17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 TTC39CQ8N584 583 aa17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 RNF139Q8WU17 664 aa17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 TSC1Q92574 1164 aa17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 SLC6A18Q96N87 628 aa17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 NIF3L1Q9GZT8 377 aa17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 RSPH9Q9H1X1 276 aaPredicted RBP17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 HBS1LQ9Y450 684 aaKnown RBP17.28■□□□□ 0.36
SUPT20H-223ENST00000497318 CKAP5Q14008 2032 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms