RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ANKRD1Q15327 319 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 AAK1Q2M2I8 961 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 GALNTL6Q49A17 601 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 AARS2Q5JTZ9 985 aaKnown RBP4.54□□□□□ -1.68
SMC4-225ENST00000497203 ACSM6Q6P461 480 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 OR4N4Q8N0Y3 316 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 FAM71DQ8N9W8 422 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 USP38Q8NB14 1042 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 OR52L2PQ8NGH6 319 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 CEP70Q8NHQ1 597 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 CSGALNACT1Q8TDX6 532 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 HERVK_113Q902F9 699 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 REPS1Q96D71 796 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 FSD1LQ9BXM9 530 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 CHODLQ9H9P2 273 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 WASH6PQ9NQA3 447 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 PI4KBQ9UBF8 816 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 ADAMTS5Q9UNA0 930 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 RRP7AQ9Y3A4 280 aaKnown RBP4.54□□□□□ -1.68
SMC4-225ENST00000497203 PCDHB7Q9Y5E2 793 aa4.54□□□□□ -1.68
SMC4-225ENST00000497203 MANSC4A6NHS7 340 aaPredicted RBP4.53□□□□□ -1.68
SMC4-225ENST00000497203 SAC3D1A6NKF1 404 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 HOXC11O43248 304 aaPredicted RBP4.53□□□□□ -1.68
SMC4-225ENST00000497203 HNRNPRO43390 633 aaKnown RBP4.53□□□□□ -1.68
SMC4-225ENST00000497203 TSPAN3O60637 253 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 POLBP06746 335 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 TMIGD3P0DMS9 266 aaPredicted RBP4.53□□□□□ -1.68
SMC4-225ENST00000497203 CNTFP26441 200 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 PCP4P48539 62 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 DIO1P49895 249 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 CYP4F2P78329 520 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 RNASELQ05823 741 aaKnown RBP4.53□□□□□ -1.68
SMC4-225ENST00000497203 DEUP1Q05D60 604 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 TRPC3Q13507 836 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 SLC12A1Q13621 1099 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 FAM187BQ17R55 369 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 CCDC142Q17RM4 750 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 CTXN3Q4LDR2 81 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 PCID2Q5JVF3 399 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 COLEC12Q5KU26 742 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 MAP3K21Q5TCX8 1036 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 ANKRD40Q6AI12 368 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 FCRLBQ6BAA4 426 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 SYT13Q7L8C5 426 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 C12orf76Q8N812 135 aaPredicted RBP4.53□□□□□ -1.68
SMC4-225ENST00000497203 FSIP1Q8NA03 581 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 GLMPQ8WWB7 406 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 TBC1D5Q92609 795 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 MPP4Q96JB8 637 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 MAELQ96JY0 434 aaKnown RBP4.53□□□□□ -1.68
SMC4-225ENST00000497203 PIGSQ96S52 555 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 MACROD1Q9BQ69 325 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 UNC45AQ9H3U1 944 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 ZHX3Q9H4I2 956 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 TFCP2L1Q9NZI6 479 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 CRYL1Q9Y2S2 319 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 TMEM98Q9Y2Y6 226 aa4.53□□□□□ -1.68
SMC4-225ENST00000497203 KAT6AQ92794 2004 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 TBC1D3DA0A087WVF3 549 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 TBC1D3IA0A087WXS9 549 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 TBC1D3EA0A087X179 549 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 TBC1D3KA0A087X1G2 549 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 CCDC187A0A096LP49 1063 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 TBC1D3BA6NDS4 549 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 TBC1D3FA6NER0 549 aaPredicted RBP4.52□□□□□ -1.69
SMC4-225ENST00000497203 WIPF3A6NGB9 483 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 FAM90A20PA6NIJ5 464 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 C3orf70A6NLC5 250 aaPredicted RBP4.52□□□□□ -1.69
SMC4-225ENST00000497203 TTC34A8MYJ7 566 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 TARM1B6A8C7 271 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 TBC1D3LB9A6J9 549 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 PRRT4C9JH25 899 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 EPB41L2O43491 1005 aaKnown RBP4.52□□□□□ -1.69
SMC4-225ENST00000497203 CA12O43570 354 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 CNPP09543 421 aaKnown RBP4.52□□□□□ -1.69
SMC4-225ENST00000497203 TBC1D3HP0C7X1 549 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 ALADP13716 330 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 DUSP1P28562 367 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 GRK5P34947 590 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 MRPS21P82921 87 aaKnown RBP4.52□□□□□ -1.69
SMC4-225ENST00000497203 TFF2Q03403 129 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 TLE3Q04726 772 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 CHRNDQ07001 517 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 LMAN2Q12907 356 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 DDX10Q13206 875 aaKnown RBP4.52□□□□□ -1.69
SMC4-225ENST00000497203 SLC4A8Q2Y0W8 1093 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 L1TD1Q5T7N2 865 aaKnown RBP4.52□□□□□ -1.69
SMC4-225ENST00000497203 TBC1D3GQ6DHY5 549 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 TBC1D3CQ6IPX1 549 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 WDR93Q6P2C0 686 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 CEP85Q6P2H3 762 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 NAPRTQ6XQN6 538 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 BBS12Q6ZW61 710 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 RASGRP2Q7LDG7 609 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 SLC29A4Q7RTT9 530 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 TBC1D3Q8IZP1 549 aaPredicted RBP4.52□□□□□ -1.69
SMC4-225ENST00000497203 SLC2A12Q8TD20 617 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 ASB12Q8WXK4 309 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 NPIPB3Q92617 1050 aa4.52□□□□□ -1.69
SMC4-225ENST00000497203 DPF1Q92782 380 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms