RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SLC52A1Q9NWF4 448 aa4.33□□□□□ -1.72
CD46-218ENST00000496723 TRNAU1APQ9NX07 287 aaKnown RBP4.33□□□□□ -1.72
CD46-218ENST00000496723 UBE2J1Q9Y385 318 aaPredicted RBP4.33□□□□□ -1.72
CD46-218ENST00000496723 PCDHB7Q9Y5E2 793 aa4.33□□□□□ -1.72
CD46-218ENST00000496723 ASNA1O43681 348 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 CER1O95813 267 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 PLAUP00749 431 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 KLRK1P26718 216 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 AKT1P31749 480 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 SLC8A1P32418 973 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 IDUAP35475 653 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 STAT6P42226 847 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 HTR3AP46098 478 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 HSF1Q00613 529 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 CFHR1Q03591 330 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 MTA1Q13330 715 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 BRD3Q15059 726 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 SLC9C1Q4G0N8 1177 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 MIDNQ504T8 468 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 RINT1Q6NUQ1 792 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 GATAD2AQ86YP4 633 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 NSMCE1Q8WV22 266 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 WDR60Q8WVS4 1066 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 NPIPB3Q92617 1050 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 CELF1Q92879 486 aaKnown RBP4.32□□□□□ -1.72
CD46-218ENST00000496723 FAR2Q96K12 515 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 SENP7Q9BQF6 1050 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 PAAF1Q9BRP4 392 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 WDR12Q9GZL7 423 aaKnown RBP4.32□□□□□ -1.72
CD46-218ENST00000496723 MLXIPLQ9NP71 852 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 TMEM184CQ9NVA4 438 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 WWOXQ9NZC7 414 aa4.32□□□□□ -1.72
CD46-218ENST00000496723 IGKV2D-30A0A075B6S6 120 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 A0A087WV62 115 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.31□□□□□ -1.72
CD46-218ENST00000496723 ABHD14A-ACY1A0A1B0GW23 586 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 GXYLT2A0PJZ3 443 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 GOLGA6L3A6NEY3 463 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 DNPH1O43598 174 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 TMEM191BP0C7N4 346 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 ST6GAL1P15907 406 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 RPS13P62277 151 aaKnown RBP4.31□□□□□ -1.72
CD46-218ENST00000496723 ID2Q02363 134 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 TNFAIP2Q03169 654 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 STIM1Q13586 685 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 SPARCL1Q14515 664 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 TRIM71Q2Q1W2 868 aaKnown RBP4.31□□□□□ -1.72
CD46-218ENST00000496723 ANKRD40Q6AI12 368 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 PGBD2Q6P3X8 592 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 SHC4Q6S5L8 630 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 RBM44Q6ZP01 1051 aaKnown RBP4.31□□□□□ -1.72
CD46-218ENST00000496723 UEVLDQ8IX04 471 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 NRSN1Q8IZ57 195 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 STYXQ8WUJ0 223 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 ASB12Q8WXK4 309 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 COQ8BQ96D53 544 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 TRMT61AQ96FX7 289 aaKnown RBP4.31□□□□□ -1.72
CD46-218ENST00000496723 P2RY11Q96G91 374 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 ZNF845Q96IR2 970 aaPredicted RBP4.31□□□□□ -1.72
CD46-218ENST00000496723 MPHOSPH6Q99547 160 aaKnown RBP4.31□□□□□ -1.72
CD46-218ENST00000496723 SCNM1Q9BWG6 230 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 TRIM2Q9C040 744 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 OBP2BQ9NPH6 170 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 MTMR4Q9NYA4 1195 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 B3GNT3Q9Y2A9 372 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 DAAM1Q9Y4D1 1078 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 LRP12Q9Y561 859 aa4.31□□□□□ -1.72
CD46-218ENST00000496723 SLC22A23A1A5C7 686 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 FAM90A10PA6NDY2 464 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 LGALS16A8MUM7 142 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 M0QYT0 321 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 RPP40O75818 363 aaKnown RBP4.3□□□□□ -1.72
CD46-218ENST00000496723 TNFRSF6BO95407 300 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 ENO1P06733 434 aaKnown RBP4.3□□□□□ -1.72
CD46-218ENST00000496723 CD63P08962 238 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 CTSAP10619 480 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 CYP19A1P11511 503 aaPredicted RBP4.3□□□□□ -1.72
CD46-218ENST00000496723 RPS6KB1P23443 525 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 HOXA7P31268 230 aaPredicted RBP4.3□□□□□ -1.72
CD46-218ENST00000496723 THBS4P35443 961 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 CPA2P48052 419 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 ZNF84P51523 738 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 DMWDQ09019 674 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 PFKFB4Q16877 469 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 AAK1Q2M2I8 961 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 GLE1Q53GS7 698 aaKnown RBP4.3□□□□□ -1.72
CD46-218ENST00000496723 EARS2Q5JPH6 523 aaKnown RBP4.3□□□□□ -1.72
CD46-218ENST00000496723 C10orf25Q5T742 122 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 C1orf228Q6PIY5 440 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 TRABD2AQ86V40 505 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 RFX6Q8HWS3 928 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 LAS2Q8IYD9 372 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 C16orf52Q8NHV5 167 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 FAM71BQ8TC56 605 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 SLC39A13Q96H72 371 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 VCPIP1Q96JH7 1222 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 GPR78Q96P69 363 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 CRB3Q9BUF7 120 aa4.3□□□□□ -1.72
CD46-218ENST00000496723 GATA5Q9BWX5 397 aaPredicted RBP4.3□□□□□ -1.72
CD46-218ENST00000496723 TP63Q9H3D4 680 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms