RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-218	ENST00000496197	DAAM2	Q86T65	1068 aa		13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	FAM217A	Q8IXS0	508 aa		13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	PLCD3	Q8N3E9	789 aa		13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	OSCP1	Q8WVF1	389 aa		13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	CD101	Q93033	1021 aa		13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	NTAN1	Q96AB6	310 aa		13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	BTN2A3P	Q96KV6	586 aa		13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	NECAB3	Q96P71	396 aa	Predicted RBP	13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	FAM83C	Q9BQN1	747 aa		13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	HPS4	Q9NQG7	708 aa		13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	KLHL11	Q9NVR0	708 aa		13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	PRKAG3	Q9UGI9	489 aa		13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	STOML2	Q9UJZ1	356 aa		13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	NEU3	Q9UQ49	428 aa		13.99	□□□□□ -0.17
PTPN7-218	ENST00000496197	FTCD	O95954	541 aa		13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	RARA	P10276	462 aa		13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	SCAP	Q12770	1279 aa		13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	IER5L	Q5T953	404 aa		13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	NT5DC3	Q86UY8	548 aa		13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	UNC45B	Q8IWX7	931 aa		13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	ZNF683	Q8IZ20	524 aa		13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	TXLNB	Q8N3L3	684 aa		13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	SLC44A3	Q8N4M1	653 aa		13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	RNF10	Q8N5U6	811 aa	Known RBP	13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	ATP6V0D2	Q8N8Y2	350 aa		13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	KRT35	Q92764	455 aa		13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	SIK2	Q9H0K1	926 aa		13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	EBF3	Q9H4W6	596 aa		13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	DUS2	Q9NX74	493 aa	Known RBP	13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	LSM7	Q9UK45	103 aa	Known RBP	13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	AP4E1	Q9UPM8	1137 aa		13.98	□□□□□ -0.17
PTPN7-218	ENST00000496197	ZSCAN12	O43309	604 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	PRPSAP2	O60256	369 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	TSPAN3	O60637	253 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	SLC2A3	P11169	496 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	TNNT1	P13805	278 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	TACR2	P21452	398 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	GDI1	P31150	447 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	SSR1	P43307	286 aa	Known RBP	13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	SEMA3B	Q13214	749 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	HS1BP3	Q53T59	392 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	ERMARD	Q5T6L9	678 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	TPGS1	Q6ZTW0	290 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	ANKS1B	Q7Z6G8	1248 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	CIR1	Q86X95	450 aa	Predicted RBP	13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	TMEM25	Q86YD3	366 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	ADGRG2	Q8IZP9	1017 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	TTC8	Q8TAM2	541 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	DEPDC1B	Q8WUY9	529 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	HSPH1	Q92598	858 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	IGSF8	Q969P0	613 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	AZIN2	Q96A70	460 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	E2F7	Q96AV8	911 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	CHFR	Q96EP1	664 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	KCTD15	Q96SI1	283 aa	Predicted RBP	13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	DCLK3	Q9C098	648 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	KCND1	Q9NSA2	647 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	GTSE1	Q9NYZ3	720 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	ZKSCAN5	Q9Y2L8	839 aa		13.97	□□□□□ -0.17
PTPN7-218	ENST00000496197	SPOP	O43791	374 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	LATS1	O95835	1130 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	CYP17A1	P05093	508 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	CD48	P09326	243 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	SLC1A1	P43005	524 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	ARSE	P51690	589 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	MLLT6	P55198	1093 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	AUH	Q13825	339 aa	Known RBP	13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	GAB4	Q2WGN9	574 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	ADGRF1	Q5T601	910 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	MANEAL	Q5VSG8	457 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	NAIF1	Q69YI7	327 aa	Predicted RBP	13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	FBXL22	Q6P050	247 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	RHBDF2	Q6PJF5	856 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	CHSY1	Q86X52	802 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	CFAP52	Q8N1V2	620 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	BHMT	Q93088	406 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	HAPLN3	Q96S86	360 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	TRMT61B	Q9BVS5	477 aa	Known RBP	13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	PLK2	Q9NYY3	685 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	IGSF9	Q9P2J2	1179 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	LCMT1	Q9UIC8	334 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	VANGL2	Q9ULK5	521 aa		13.96	□□□□□ -0.17
PTPN7-218	ENST00000496197	CHD5	Q8TDI0	1954 aa		13.96	□□□□□ -0.18
PTPN7-218	ENST00000496197	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.95	□□□□□ -0.18
PTPN7-218	ENST00000496197	FANCG	O15287	622 aa		13.95	□□□□□ -0.18
PTPN7-218	ENST00000496197	CHAD	O15335	359 aa		13.95	□□□□□ -0.18
PTPN7-218	ENST00000496197	DES	P17661	470 aa		13.95	□□□□□ -0.18
PTPN7-218	ENST00000496197	L1CAM	P32004	1257 aa		13.95	□□□□□ -0.18
PTPN7-218	ENST00000496197	DEK	P35659	375 aa	Known RBP	13.95	□□□□□ -0.18
PTPN7-218	ENST00000496197	IFNAR2	P48551	515 aa		13.95	□□□□□ -0.18
PTPN7-218	ENST00000496197	SLC11A2	P49281	568 aa		13.95	□□□□□ -0.18
PTPN7-218	ENST00000496197	RPS24	P62847	133 aa	Known RBP	13.95	□□□□□ -0.18
PTPN7-218	ENST00000496197	LY6G5C	Q5SRR4	150 aa		13.95	□□□□□ -0.18
PTPN7-218	ENST00000496197	FYB2	Q5VWT5	728 aa		13.95	□□□□□ -0.18
PTPN7-218	ENST00000496197	LGI2	Q8N0V4	545 aa		13.95	□□□□□ -0.18
PTPN7-218	ENST00000496197	CPXM2	Q8N436	756 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms