RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CDY2AQ9Y6F7 541 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.41□□□□□ -0.58
CMSS1-208ENST00000496116 A0A0G2JND7 137 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 VGLL3A8MV65 326 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 RFPL1O75677 317 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 AP1G2O75843 785 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 ALDH1A2O94788 518 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 BGNP21810 368 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 GRIA1P42261 906 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 ARFIP2P53365 341 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 DAOAP59103 153 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 PITX1P78337 314 aaPredicted RBP11.41□□□□□ -0.58
CMSS1-208ENST00000496116 IFRD2Q12894 506 aaPredicted RBP11.41□□□□□ -0.58
CMSS1-208ENST00000496116 SYPL2Q5VXT5 272 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 STEAP4Q687X5 459 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 TRMT10BQ6PF06 316 aaKnown RBP11.41□□□□□ -0.58
CMSS1-208ENST00000496116 FAM35AQ86V20 835 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 PDCD7Q8N8D1 485 aaKnown RBP11.41□□□□□ -0.58
CMSS1-208ENST00000496116 TMEM237Q96Q45 408 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 TUBB6Q9BUF5 446 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 ULBP1Q9BZM6 244 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 SLC13A1Q9BZW2 595 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 CRTAC1Q9NQ79 661 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 SAR1AQ9NR31 198 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 PIGVQ9NUD9 493 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 RRN3Q9NYV6 651 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 MOCS1Q9NZB8 636 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 SEPT10Q9P0V9 454 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 HAO1Q9UJM8 370 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 CDH9Q9ULB4 789 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 ST3GAL5Q9UNP4 418 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 TRIM33Q9UPN9 1127 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 PTCH2Q9Y6C5 1203 aa11.41□□□□□ -0.58
CMSS1-208ENST00000496116 TSC2P49815 1807 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 WDR27A2RRH5 827 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 C9IYK1 514 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 TNPO2O14787 897 aaKnown RBP11.4□□□□□ -0.58
CMSS1-208ENST00000496116 NCAM2O15394 837 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 DUSP11O75319 330 aaKnown RBP11.4□□□□□ -0.58
CMSS1-208ENST00000496116 PGAM1P18669 254 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 ADRA1BP35368 520 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 CLCNKBP51801 687 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 GJA9P57773 515 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 SCAPQ12770 1279 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 NAB1Q13506 487 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 BMPR2Q13873 1038 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 DPYSQ14117 519 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 KIAA0319Q5VV43 1072 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 C17orf99Q6UX52 265 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 TIFABQ6ZNK6 161 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 CDHR3Q6ZTQ4 885 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 MTDHQ86UE4 582 aaKnown RBP11.4□□□□□ -0.58
CMSS1-208ENST00000496116 RAB3IL1Q8TBN0 382 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 PCED1BQ96HM7 432 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 GAD1Q99259 594 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 MTG1Q9BT17 334 aaPredicted RBP11.4□□□□□ -0.58
CMSS1-208ENST00000496116 PRDM12Q9H4Q4 367 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 GIT1Q9Y2X7 761 aa11.4□□□□□ -0.58
CMSS1-208ENST00000496116 MYO18AQ92614 2054 aaKnown RBP11.4□□□□□ -0.58
CMSS1-208ENST00000496116 DCLK1O15075 740 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 UGT1A9O60656 530 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 F9P00740 461 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 RPLP2P05387 115 aaKnown RBP11.39□□□□□ -0.59
CMSS1-208ENST00000496116 NCAM1P13591 858 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 PCSK1P29120 753 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 RPL9P32969 192 aaKnown RBP11.39□□□□□ -0.59
CMSS1-208ENST00000496116 CRHR1P34998 444 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 ZNF135P52742 658 aaPredicted RBP11.39□□□□□ -0.59
CMSS1-208ENST00000496116 TPI1P60174 286 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 PLEKHG4Q58EX7 1191 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 GNASQ5JWF2 1037 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 WLSQ5T9L3 541 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 MROH9Q5TGP6 573 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 ZNF449Q6P9G9 518 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 HFE2Q6ZVN8 426 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 MARK2Q7KZI7 788 aaKnown RBP11.39□□□□□ -0.59
CMSS1-208ENST00000496116 NDUFAF2Q8N183 169 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 GSTCDQ8NEC7 633 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 ARMC2Q8NEN0 867 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 RFWD2Q8NHY2 731 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 TBC1D31Q96DN5 1066 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 PGAP3Q96FM1 320 aaPredicted RBP11.39□□□□□ -0.59
CMSS1-208ENST00000496116 SMARCD1Q96GM5 515 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 OXNAD1Q96HP4 312 aaPredicted RBP11.39□□□□□ -0.59
CMSS1-208ENST00000496116 UGT1A7Q9HAW7 530 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 UGT1A10Q9HAW8 530 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 UGT1A8Q9HAW9 530 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 TMPRSS4Q9NRS4 437 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 PCMTD2Q9NV79 361 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 IGSF9Q9P2J2 1179 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 NR2E3Q9Y5X4 410 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 YJEFN3A6XGL0 299 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 E7ENQ6 273 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 TRAFD1O14545 582 aaPredicted RBP11.39□□□□□ -0.59
CMSS1-208ENST00000496116 NRP1O14786 923 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 GPR182O15218 404 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 LTFP02788 710 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 ERCC2P18074 760 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 CCND1P24385 295 aa11.39□□□□□ -0.59
CMSS1-208ENST00000496116 PSMB4P28070 264 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms