RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 HAPLN3Q96S86 360 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 EPAS1Q99814 870 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 TLR8Q9NR97 1041 aaKnown RBP16.92■□□□□ 0.3
HLA-A-208ENST00000496081 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.92■□□□□ 0.3
HLA-A-208ENST00000496081 PRKAG2Q9UGJ0 569 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 SHOC2Q9UQ13 582 aa16.92■□□□□ 0.3
HLA-A-208ENST00000496081 KCNU1A8MYU2 1149 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 HACD1B0YJ81 288 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 RIPK2O43353 540 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 PAGE1O75459 146 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 GJB5O95377 273 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 NUDT17P0C025 328 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 HTRA4P83105 476 aaPredicted RBP16.91■□□□□ 0.3
HLA-A-208ENST00000496081 FPGSQ05932 587 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 ZNF844Q08AG5 666 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 CEP85LQ5SZL2 805 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 ANKRD22Q5VYY1 191 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 TPGS2Q68CL5 300 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 TRMT10CQ7L0Y3 403 aaKnown RBP16.91■□□□□ 0.3
HLA-A-208ENST00000496081 GOLGA6L1Q8N7Z2 621 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 ARL8AQ96BM9 186 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 CEP295NLQ96MC4 621 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 TTLL2Q9BWV7 592 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 TLR6Q9Y2C9 796 aa16.91■□□□□ 0.3
HLA-A-208ENST00000496081 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.9■□□□□ 0.3
HLA-A-208ENST00000496081 TBX18O95935 607 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 URODP06132 367 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 ZDHHC11BP0C7U3 371 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 LINC00271P0C7V0 271 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 EPHB2P29323 1055 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 PPM1AP35813 382 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 EFEMP1Q12805 493 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 DENND2CQ68D51 928 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 RELL1Q8IUW5 271 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 VPS52Q8N1B4 723 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 TFB1MQ8WVM0 346 aaKnown RBP16.9■□□□□ 0.3
HLA-A-208ENST00000496081 AUTS2Q8WXX7 1259 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 SLC39A13Q96H72 371 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 RBM15Q96T37 977 aaKnown RBP eCLIP16.9■□□□□ 0.3
HLA-A-208ENST00000496081 LGMNQ99538 433 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 SIK2Q9H0K1 926 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 TMEM51Q9NW97 253 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 CXXC1Q9P0U4 656 aaPredicted RBP16.9■□□□□ 0.3
HLA-A-208ENST00000496081 PAK5Q9P286 719 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 HSFX1Q9UBD0 423 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 MAGED2Q9UNF1 606 aaPredicted RBP16.9■□□□□ 0.3
HLA-A-208ENST00000496081 NEU3Q9UQ49 428 aa16.9■□□□□ 0.3
HLA-A-208ENST00000496081 SHBGP04278 402 aa16.89■□□□□ 0.3
HLA-A-208ENST00000496081 VAV1P15498 845 aa16.89■□□□□ 0.3
HLA-A-208ENST00000496081 DNAJB2P25686 324 aa16.89■□□□□ 0.3
HLA-A-208ENST00000496081 ACTN2P35609 894 aa16.89■□□□□ 0.3
HLA-A-208ENST00000496081 BASP1P80723 227 aaKnown RBP16.89■□□□□ 0.3
HLA-A-208ENST00000496081 TTMPQ5BVD1 217 aa16.89■□□□□ 0.3
HLA-A-208ENST00000496081 HEATR6Q6AI08 1181 aaKnown RBP16.89■□□□□ 0.3
HLA-A-208ENST00000496081 HOOK3Q86VS8 718 aa16.89■□□□□ 0.3
HLA-A-208ENST00000496081 TP53INP2Q8IXH6 220 aa16.89■□□□□ 0.3
HLA-A-208ENST00000496081 FCRL2Q96LA5 508 aaPredicted RBP16.89■□□□□ 0.3
HLA-A-208ENST00000496081 OLA1Q9NTK5 396 aaKnown RBP16.89■□□□□ 0.3
HLA-A-208ENST00000496081 PCDHB12Q9Y5F1 795 aa16.89■□□□□ 0.3
HLA-A-208ENST00000496081 NR2E3Q9Y5X4 410 aa16.89■□□□□ 0.3
HLA-A-208ENST00000496081 TCRBV7S3A2A0A539 114 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 GOLGA8KD6RF30 607 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 GCATO75600 419 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 TTC4O95801 387 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 SRGAP2BP0DMP2 458 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 EIF3BP55884 814 aaKnown RBP16.89■□□□□ 0.29
HLA-A-208ENST00000496081 TBX4P57082 545 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 GAD2Q05329 585 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 RAB33AQ14088 237 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 PDK1Q15118 436 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 PRKD1Q15139 912 aaPredicted RBP16.89■□□□□ 0.29
HLA-A-208ENST00000496081 KYNUQ16719 465 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 TMEM240Q5SV17 173 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 ARTNQ5T4W7 220 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 FIBCD1Q8N539 461 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 NPWQ8N729 165 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 CCDC110Q8TBZ0 833 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 HTR3CQ8WXA8 447 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 UBE2OQ9C0C9 1292 aaKnown RBP16.89■□□□□ 0.29
HLA-A-208ENST00000496081 PRDM12Q9H4Q4 367 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 CYP4F11Q9HBI6 524 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 LRRC4CQ9HCJ2 640 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 VPS18Q9P253 973 aa16.89■□□□□ 0.29
HLA-A-208ENST00000496081 XPO7Q9UIA9 1087 aaKnown RBP16.89■□□□□ 0.29
HLA-A-208ENST00000496081 C5orf60A6NFR6 353 aa16.88■□□□□ 0.29
HLA-A-208ENST00000496081 GOLGA8MH3BSY2 632 aa16.88■□□□□ 0.29
HLA-A-208ENST00000496081 FGF18O76093 207 aa16.88■□□□□ 0.29
HLA-A-208ENST00000496081 TMEM63AO94886 807 aa16.88■□□□□ 0.29
HLA-A-208ENST00000496081 MOCS2O96007 188 aaPredicted RBP16.88■□□□□ 0.29
HLA-A-208ENST00000496081 C10orf120Q5SQS8 335 aa16.88■□□□□ 0.29
HLA-A-208ENST00000496081 MANEALQ5VSG8 457 aa16.88■□□□□ 0.29
HLA-A-208ENST00000496081 CEP128Q6ZU80 1094 aa16.88■□□□□ 0.29
HLA-A-208ENST00000496081 PDZD4Q76G19 769 aaPredicted RBP16.88■□□□□ 0.29
HLA-A-208ENST00000496081 UHMK1Q8TAS1 419 aaKnown RBP16.88■□□□□ 0.29
HLA-A-208ENST00000496081 CCSER2Q9H7U1 834 aa16.88■□□□□ 0.29
HLA-A-208ENST00000496081 TMBIM4Q9HC24 238 aa16.88■□□□□ 0.29
HLA-A-208ENST00000496081 RAB6BQ9NRW1 208 aa16.88■□□□□ 0.29
HLA-A-208ENST00000496081 MRPL17Q9NRX2 175 aaKnown RBP16.88■□□□□ 0.29
HLA-A-208ENST00000496081 NINJ2Q9NZG7 142 aa16.88■□□□□ 0.29
HLA-A-208ENST00000496081 MARCH2Q9P0N8 246 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms