RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	KPNA1	P52294	538 aa	Predicted RBP	12.37	□□□□□ -0.43
APTX-233	ENST00000496030	GALC	P54803	685 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	TBX4	P57082	545 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	RUNX3	Q13761	415 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	LPAL2	Q16609	132 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	SLC25A52	Q3SY17	297 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	SLC44A4	Q53GD3	710 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	ZC3H12A	Q5D1E8	599 aa	Known RBP	12.37	□□□□□ -0.43
APTX-233	ENST00000496030	SH3PXD2A	Q5TCZ1	1133 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	CC2D1A	Q6P1N0	951 aa	Predicted RBP	12.37	□□□□□ -0.43
APTX-233	ENST00000496030	DNAJC24	Q6P3W2	148 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	RHBDF2	Q6PJF5	856 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	DENND1C	Q8IV53	801 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	FAM217A	Q8IXS0	508 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	DNASE1L2	Q92874	299 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	ARHGEF26	Q96DR7	871 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	PGAP3	Q96FM1	320 aa	Predicted RBP	12.37	□□□□□ -0.43
APTX-233	ENST00000496030	CCDC42	Q96M95	316 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	CFAP57	Q96MR6	1250 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	SERPINB11	Q96P15	392 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	PACSIN1	Q9BY11	444 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	TRIM7	Q9C029	511 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	THAP2	Q9H0W7	228 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	ANLN	Q9NQW6	1124 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	PIGV	Q9NUD9	493 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	RRN3	Q9NYV6	651 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	TBC1D14	Q9P2M4	693 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	CNOT8	Q9UFF9	292 aa	Known RBP	12.37	□□□□□ -0.43
APTX-233	ENST00000496030	SH3BP1	Q9Y3L3	701 aa		12.37	□□□□□ -0.43
APTX-233	ENST00000496030	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	12.36	□□□□□ -0.43
APTX-233	ENST00000496030		M0QYT0	321 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	SLC9A3R1	O14745	358 aa	Predicted RBP	12.36	□□□□□ -0.43
APTX-233	ENST00000496030	AKR1B10	O60218	316 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	CYP17A1	P05093	508 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	CYP1A2	P05177	515 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	MYBL1	P10243	752 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	PDGFRA	P16234	1089 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	PTPN9	P43378	593 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	SOX9	P48436	509 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	IFNAR2	P48551	515 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	MLLT6	P55198	1093 aa	Predicted RBP	12.36	□□□□□ -0.43
APTX-233	ENST00000496030	PFKP	Q01813	784 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	ZNF252P-AS1	Q0IIN9	211 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	UBXN2B	Q14CS0	331 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	ACAP1	Q15027	740 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	ITPRIPL2	Q3MIP1	535 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	ARTN	Q5T4W7	220 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	NADSYN1	Q6IA69	706 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	TMEM25	Q86YD3	366 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	ZNF687	Q8N1G0	1237 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	TTC8	Q8TAM2	541 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	AZIN2	Q96A70	460 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	ZNF653	Q96CK0	615 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	OTUB2	Q96DC9	234 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	SHD	Q96IW2	340 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	SELENOO	Q9BVL4	669 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	DCLK3	Q9C098	648 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	ECT2	Q9H8V3	914 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	FAM204A	Q9H8W3	233 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	HEBP1	Q9NRV9	189 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	PARVA	Q9NVD7	372 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	DDIT4	Q9NX09	232 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	XPO7	Q9UIA9	1087 aa	Known RBP	12.36	□□□□□ -0.43
APTX-233	ENST00000496030	SETX	Q7Z333	2677 aa	Known RBP	12.36	□□□□□ -0.43
APTX-233	ENST00000496030	IGF2R	P11717	2491 aa		12.36	□□□□□ -0.43
APTX-233	ENST00000496030	GOLGA6L7	A0A1B0GV03	622 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	ANKRD62	A6NC57	917 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	SOWAHD	A6NJG2	315 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	FAM170B	A6NMN3	283 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	ABCB4	P21439	1286 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	KCNA4	P22459	653 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	SULT1E1	P49888	294 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	ZNF143	P52747	638 aa	Predicted RBP	12.35	□□□□□ -0.43
APTX-233	ENST00000496030	PPP2R5D	Q14738	602 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	DHCR24	Q15392	516 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	MLF2	Q15773	248 aa	Predicted RBP	12.35	□□□□□ -0.43
APTX-233	ENST00000496030	C15orf59	Q2T9L4	293 aa	Predicted RBP	12.35	□□□□□ -0.43
APTX-233	ENST00000496030	FAM133B	Q5BKY9	247 aa	Known RBP	12.35	□□□□□ -0.43
APTX-233	ENST00000496030	LY6G5C	Q5SRR4	150 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	NAIF1	Q69YI7	327 aa	Predicted RBP	12.35	□□□□□ -0.43
APTX-233	ENST00000496030	TXNDC11	Q6PKC3	985 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	RAD9B	Q6WBX8	426 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	TMTC1	Q8IUR5	882 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	CCDC170	Q8IYT3	715 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	ARFGAP1	Q8N6T3	406 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	NETO1	Q8TDF5	533 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	ATP2A3	Q93084	1043 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	MYEOV	Q96EZ4	313 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	TRIM11	Q96F44	468 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	MCEE	Q96PE7	176 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	12.35	□□□□□ -0.43
APTX-233	ENST00000496030	MYO1A	Q9UBC5	1043 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	LSM7	Q9UK45	103 aa	Known RBP	12.35	□□□□□ -0.43
APTX-233	ENST00000496030	GMEB2	Q9UKD1	530 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	ANGPTL2	Q9UKU9	493 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	ZNF510	Q9Y2H8	683 aa		12.35	□□□□□ -0.43
APTX-233	ENST00000496030	EPN1	Q9Y6I3	576 aa	Predicted RBP	12.35	□□□□□ -0.43
APTX-233	ENST00000496030	SYNJ2BP-COX16	A0A087WUM0	186 aa		12.34	□□□□□ -0.43
APTX-233	ENST00000496030	GDF9	O60383	454 aa		12.34	□□□□□ -0.43
APTX-233	ENST00000496030	ACSL4	O60488	711 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms