RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 ZNF177Q13360 481 aaPredicted RBP9.36□□□□□ -0.91
GARNL3-219ENST00000495172 PRR30Q53SZ7 412 aaPredicted RBP9.36□□□□□ -0.91
GARNL3-219ENST00000495172 HECTD3Q5T447 861 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 TDRD10Q5VZ19 366 aaKnown RBP9.36□□□□□ -0.91
GARNL3-219ENST00000495172 FAM171BQ6P995 826 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 HTR3DQ70Z44 454 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 RAB11FIP2Q7L804 512 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 MCEMP1Q8IX19 187 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 SMC5Q8IY18 1101 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 PRR7Q8TB68 274 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 FBXO32Q969P5 355 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 BICD1Q96G01 975 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 PPP1R13BQ96KQ4 1090 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 CCSER1Q9C0I3 900 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 IKZF4Q9H2S9 585 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 CUEDC1Q9NWM3 386 aaPredicted RBP9.36□□□□□ -0.91
GARNL3-219ENST00000495172 PCDHGA7Q9Y5G6 932 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 BHMG1C9JSJ3 638 aaPredicted RBP9.35□□□□□ -0.91
GARNL3-219ENST00000495172 MUSKO15146 869 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 NKX2-8O15522 239 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 DUX1O43812 170 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 RNASEH2AO75792 299 aaKnown RBP9.35□□□□□ -0.91
GARNL3-219ENST00000495172 PIAS2O75928 621 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 MAPTP10636 758 aaKnown RBP9.35□□□□□ -0.91
GARNL3-219ENST00000495172 ZNF132P52740 706 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 RCAN1P53805 252 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 KLRB1Q12918 225 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 STRN3Q13033 797 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 SV2CQ496J9 727 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 LACTB2Q53H82 288 aaPredicted RBP9.35□□□□□ -0.91
GARNL3-219ENST00000495172 MDH1BQ5I0G3 518 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 FYB2Q5VWT5 728 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 OXR1Q8N573 874 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 GALNT11Q8NCW6 608 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 TMEM161BQ8NDZ6 487 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 PCED1BQ96HM7 432 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 FUBP3Q96I24 572 aaKnown RBP eCLIP9.35□□□□□ -0.91
GARNL3-219ENST00000495172 SLITRK1Q96PX8 696 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 SYT15Q9BQS2 421 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 KLF16Q9BXK1 252 aaPredicted RBP9.35□□□□□ -0.91
GARNL3-219ENST00000495172 PABPC3Q9H361 631 aaKnown RBP9.35□□□□□ -0.91
GARNL3-219ENST00000495172 SLC27A6Q9Y2P4 619 aa9.35□□□□□ -0.91
GARNL3-219ENST00000495172 C10orf142B7Z368 130 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 E9PMD0 336 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 OGTO15294 1046 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 HUS1O60921 280 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 DDAH2O95865 285 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 PLCG1P19174 1290 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 METAP1P53582 386 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 NOP14P78316 857 aaKnown RBP9.34□□□□□ -0.91
GARNL3-219ENST00000495172 NAA30Q147X3 362 aaPredicted RBP9.34□□□□□ -0.91
GARNL3-219ENST00000495172 SOWAHAQ2M3V2 549 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 TTC31Q49AM3 519 aaPredicted RBP9.34□□□□□ -0.91
GARNL3-219ENST00000495172 HS1BP3Q53T59 392 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 ATP1A1-AS1Q5TC04 95 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 SLC39A4Q6P5W5 647 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 ANKS1BQ7Z6G8 1248 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 XYLT1Q86Y38 959 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 MFSD2AQ8NA29 543 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 CPT1CQ8TCG5 803 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 UCMAQ8WVF2 138 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 KBTBD7Q8WVZ9 684 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 NOX5Q96PH1 765 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 ZNF518BQ9C0D4 1074 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 NACA2Q9H009 215 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 ZSWIM6Q9HCJ5 1215 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 SEPT10Q9P0V9 454 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 ARHGAP20Q9P2F6 1191 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 TUBD1Q9UJT1 453 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 CPSF3Q9UKF6 684 aaKnown RBP9.34□□□□□ -0.91
GARNL3-219ENST00000495172 AGAP1Q9UPQ3 857 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 SNX9Q9Y5X1 595 aa9.34□□□□□ -0.91
GARNL3-219ENST00000495172 FBN1P35555 2871 aaKnown RBP9.34□□□□□ -0.92
GARNL3-219ENST00000495172 TTLL8A6PVC2 850 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 CCER2I3L3R5 266 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 KLKB1P03952 638 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 ITGB3P05106 788 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 LIFP15018 202 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 YWHAQP27348 245 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 TRAPPC10P48553 1259 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 MAPK10P53779 464 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 DEFB133Q30KQ1 61 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 ZNF776Q68DI1 518 aaPredicted RBP9.33□□□□□ -0.92
GARNL3-219ENST00000495172 NAPEPLDQ6IQ20 393 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 VSTM1Q6UX27 236 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 ZPBP2Q6X784 338 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 C4orf50Q6ZRC1 276 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 HS2ST1Q7LGA3 356 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 DTX1Q86Y01 620 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 AADATQ8N5Z0 425 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 TEX19Q8NA77 164 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 ZSWIM2Q8NEG5 633 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 OR2T34Q8NGX1 318 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 OR14C36Q8NHC7 312 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 KLK6Q92876 244 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 USP7Q93009 1102 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 PMEPA1Q969W9 287 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 KCNK16Q96T55 309 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 MDFIQ99750 246 aa9.33□□□□□ -0.92
GARNL3-219ENST00000495172 MSTO1Q9BUK6 570 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms