RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 LCP1P13796 627 aa23.02■■□□□ 1.28
HDDC3-203ENST00000494993 FMO5P49326 533 aa23.02■■□□□ 1.28
HDDC3-203ENST00000494993 CAMK2GQ13555 558 aaPredicted RBP23.02■■□□□ 1.28
HDDC3-203ENST00000494993 FNDC3BQ53EP0 1204 aaKnown RBP23.02■■□□□ 1.28
HDDC3-203ENST00000494993 MSANTD2Q6P1R3 559 aa23.02■■□□□ 1.28
HDDC3-203ENST00000494993 CHST9Q7L1S5 443 aa23.02■■□□□ 1.28
HDDC3-203ENST00000494993 NAXDQ8IW45 347 aa23.02■■□□□ 1.28
HDDC3-203ENST00000494993 CHCHD4Q8N4Q1 142 aa23.02■■□□□ 1.28
HDDC3-203ENST00000494993 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.02■■□□□ 1.28
HDDC3-203ENST00000494993 ENGASEQ8NFI3 743 aa23.02■■□□□ 1.28
HDDC3-203ENST00000494993 ZCCHC14Q8WYQ9 949 aaKnown RBP23.02■■□□□ 1.28
HDDC3-203ENST00000494993 TFAP2BQ92481 460 aa23.02■■□□□ 1.28
HDDC3-203ENST00000494993 SMARCE1Q969G3 411 aa23.02■■□□□ 1.28
HDDC3-203ENST00000494993 GTPBP4Q9BZE4 634 aaKnown RBP23.02■■□□□ 1.28
HDDC3-203ENST00000494993 TMEM245Q9H330 911 aa23.02■■□□□ 1.28
HDDC3-203ENST00000494993 PLXNB3Q9ULL4 1909 aa23.02■■□□□ 1.28
HDDC3-203ENST00000494993 NYNRINQ9P2P1 1898 aaKnown RBP23.01■■□□□ 1.27
HDDC3-203ENST00000494993 PAEPP09466 180 aa23.01■■□□□ 1.27
HDDC3-203ENST00000494993 TRIP6Q15654 476 aaKnown RBP23.01■■□□□ 1.27
HDDC3-203ENST00000494993 TMEM270Q6UE05 265 aa23.01■■□□□ 1.27
HDDC3-203ENST00000494993 RAB44Q7Z6P3 723 aaPredicted RBP23.01■■□□□ 1.27
HDDC3-203ENST00000494993 KIAA0907Q7Z7F0 614 aaPredicted RBP23.01■■□□□ 1.27
HDDC3-203ENST00000494993 CYB5D2Q8WUJ1 264 aa23.01■■□□□ 1.27
HDDC3-203ENST00000494993 METTL14Q9HCE5 456 aaKnown RBP23.01■■□□□ 1.27
HDDC3-203ENST00000494993 ABCB8Q9NUT2 735 aa23.01■■□□□ 1.27
HDDC3-203ENST00000494993 EIF2B4Q9UI10 523 aaKnown RBP23.01■■□□□ 1.27
HDDC3-203ENST00000494993 GGA2Q9UJY4 613 aa23.01■■□□□ 1.27
HDDC3-203ENST00000494993 RALYQ9UKM9 306 aaKnown RBP23.01■■□□□ 1.27
HDDC3-203ENST00000494993 PLA2G4CQ9UP65 541 aa23.01■■□□□ 1.27
HDDC3-203ENST00000494993 PCDHB9Q9Y5E1 797 aa23.01■■□□□ 1.27
HDDC3-203ENST00000494993 PKD1L2Q7Z442 2459 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 SPEGQ15772 3267 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 FAM221BA6H8Z2 402 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 GOLGA6L4A6NEF3 574 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 BCAT2O15382 392 aaPredicted RBP23■■□□□ 1.27
HDDC3-203ENST00000494993 GABBR2O75899 941 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 RGS7P49802 495 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 SGSHP51688 502 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 PMF1Q6P1K2 205 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 ADIPOR2Q86V24 386 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 FAM124AQ86V42 546 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 AHI1Q8N157 1196 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 ZNF366Q8N895 744 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 SLC35F5Q8WV83 523 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 IRGQQ8WZA9 623 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 NT5C1BQ96P26 610 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 PCED1AQ9H1Q7 454 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 LHX5Q9H2C1 402 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 WDR3Q9UNX4 943 aaKnown RBP eCLIP23■■□□□ 1.27
HDDC3-203ENST00000494993 PCDHB4Q9Y5E5 795 aa23■■□□□ 1.27
HDDC3-203ENST00000494993 SRRM3A6NNA2 597 aaPredicted RBP22.99■■□□□ 1.27
HDDC3-203ENST00000494993 PSMA7O14818 248 aa22.99■■□□□ 1.27
HDDC3-203ENST00000494993 PMM2O15305 246 aa22.99■■□□□ 1.27
HDDC3-203ENST00000494993 IGLV3-27P01718 113 aa22.99■■□□□ 1.27
HDDC3-203ENST00000494993 C7P10643 843 aa22.99■■□□□ 1.27
HDDC3-203ENST00000494993 PABPC1P11940 636 aaKnown RBP22.99■■□□□ 1.27
HDDC3-203ENST00000494993 CNGA2Q16280 664 aa22.99■■□□□ 1.27
HDDC3-203ENST00000494993 CEP63Q96MT8 703 aa22.99■■□□□ 1.27
HDDC3-203ENST00000494993 ZSWIM1Q9BR11 485 aa22.99■■□□□ 1.27
HDDC3-203ENST00000494993 IRX2Q9BZI1 471 aaPredicted RBP22.99■■□□□ 1.27
HDDC3-203ENST00000494993 DMXL2Q8TDJ6 3036 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 M0QYV0 167 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 RNF225M0QZC1 329 aaPredicted RBP22.98■■□□□ 1.27
HDDC3-203ENST00000494993 PIK3R2O00459 728 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 CER1O95813 267 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 LTFP02788 710 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 BNC1Q01954 994 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 STIM1Q13586 685 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 STILQ15468 1287 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 PTPRNQ16849 979 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 MPP7Q5T2T1 576 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 PIK3R6Q5UE93 754 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 NUGGCQ68CJ6 796 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 MBLAC2Q68D91 279 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 RFWD3Q6PCD5 774 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 UNC45BQ8IWX7 931 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 PPM1KQ8N3J5 372 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 C1orf216Q8TAB5 229 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 WFDC5Q8TCV5 224 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 KAT5Q92993 513 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 GAREM1Q9H706 876 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 FBRSQ9HAH7 460 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 IL21RQ9HBE5 538 aa22.98■■□□□ 1.27
HDDC3-203ENST00000494993 HOOK1Q9UJC3 728 aaKnown RBP22.98■■□□□ 1.27
HDDC3-203ENST00000494993 PLXNA2O75051 1894 aa22.97■■□□□ 1.27
HDDC3-203ENST00000494993 TBL1XO60907 577 aa22.97■■□□□ 1.27
HDDC3-203ENST00000494993 DLDP09622 509 aaKnown RBP22.97■■□□□ 1.27
HDDC3-203ENST00000494993 FTH1P19P0C7X4 201 aa22.97■■□□□ 1.27
HDDC3-203ENST00000494993 ZNF883P0CG24 379 aa22.97■■□□□ 1.27
HDDC3-203ENST00000494993 BRD2P25440 801 aaKnown RBP22.97■■□□□ 1.27
HDDC3-203ENST00000494993 ACSL1P33121 698 aa22.97■■□□□ 1.27
HDDC3-203ENST00000494993 MATKP42679 507 aa22.97■■□□□ 1.27
HDDC3-203ENST00000494993 SLC11A2P49281 568 aa22.97■■□□□ 1.27
HDDC3-203ENST00000494993 RING1Q06587 406 aa22.97■■□□□ 1.27
HDDC3-203ENST00000494993 CCDC40Q4G0X9 1142 aa22.97■■□□□ 1.27
HDDC3-203ENST00000494993 FAM133BQ5BKY9 247 aaKnown RBP22.97■■□□□ 1.27
HDDC3-203ENST00000494993 IL27RAQ6UWB1 636 aa22.97■■□□□ 1.27
HDDC3-203ENST00000494993 CLEC4CQ8WTT0 213 aa22.97■■□□□ 1.27
HDDC3-203ENST00000494993 ADAMTS14Q8WXS8 1223 aa22.97■■□□□ 1.27
HDDC3-203ENST00000494993 SNX19Q92543 992 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms