RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 NT5C1BQ96P26 610 aa24.22■■□□□ 1.47
COL27A1-208ENST00000494780 MIR1-1HGQ9H1L0 117 aa24.22■■□□□ 1.47
COL27A1-208ENST00000494780 PCED1AQ9H1Q7 454 aa24.22■■□□□ 1.47
COL27A1-208ENST00000494780 FAM221BA6H8Z2 402 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 PSMA7O14818 248 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 MSI1O43347 362 aaKnown RBP24.21■■□□□ 1.47
COL27A1-208ENST00000494780 C7P10643 843 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 HLA-EP13747 358 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 STIM1Q13586 685 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 TRIP6Q15654 476 aaKnown RBP24.21■■□□□ 1.47
COL27A1-208ENST00000494780 CNGA2Q16280 664 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 FNDC3BQ53EP0 1204 aaKnown RBP24.21■■□□□ 1.47
COL27A1-208ENST00000494780 CHST9Q7L1S5 443 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 NAXDQ8IW45 347 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 AHI1Q8N157 1196 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 TFAP2BQ92481 460 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 ERCC4Q92889 916 aaPredicted RBP24.21■■□□□ 1.47
COL27A1-208ENST00000494780 CEP63Q96MT8 703 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 TIGD1Q96MW7 591 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 CAMK1GQ96NX5 476 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 TMEM245Q9H330 911 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 ABCB8Q9NUT2 735 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 GGA2Q9UJY4 613 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 PCDHB9Q9Y5E1 797 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 PCDHB4Q9Y5E5 795 aa24.21■■□□□ 1.47
COL27A1-208ENST00000494780 BCAT2O15382 392 aaPredicted RBP24.2■■□□□ 1.46
COL27A1-208ENST00000494780 PABPC1P11940 636 aaKnown RBP24.2■■□□□ 1.46
COL27A1-208ENST00000494780 STILQ15468 1287 aa24.2■■□□□ 1.46
COL27A1-208ENST00000494780 MPP7Q5T2T1 576 aa24.2■■□□□ 1.46
COL27A1-208ENST00000494780 PMF1Q6P1K2 205 aa24.2■■□□□ 1.46
COL27A1-208ENST00000494780 RAB44Q7Z6P3 723 aaPredicted RBP24.2■■□□□ 1.46
COL27A1-208ENST00000494780 ADIPOR2Q86V24 386 aa24.2■■□□□ 1.46
COL27A1-208ENST00000494780 CACUL1Q86Y37 369 aa24.2■■□□□ 1.46
COL27A1-208ENST00000494780 UNC45BQ8IWX7 931 aa24.2■■□□□ 1.46
COL27A1-208ENST00000494780 DHTKD1Q96HY7 919 aaPredicted RBP24.2■■□□□ 1.46
COL27A1-208ENST00000494780 LHX5Q9H2C1 402 aa24.2■■□□□ 1.46
COL27A1-208ENST00000494780 FBRSQ9HAH7 460 aa24.2■■□□□ 1.46
COL27A1-208ENST00000494780 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.2■■□□□ 1.46
COL27A1-208ENST00000494780 GABBR2O75899 941 aa24.19■■□□□ 1.46
COL27A1-208ENST00000494780 IGLV3-27P01718 113 aa24.19■■□□□ 1.46
COL27A1-208ENST00000494780 PPP1R2P41236 205 aa24.19■■□□□ 1.46
COL27A1-208ENST00000494780 RGS7P49802 495 aa24.19■■□□□ 1.46
COL27A1-208ENST00000494780 NUGGCQ68CJ6 796 aa24.19■■□□□ 1.46
COL27A1-208ENST00000494780 IL27RAQ6UWB1 636 aa24.19■■□□□ 1.46
COL27A1-208ENST00000494780 CHCHD4Q8N4Q1 142 aa24.19■■□□□ 1.46
COL27A1-208ENST00000494780 ZNF557Q8N988 423 aaPredicted RBP24.19■■□□□ 1.46
COL27A1-208ENST00000494780 CYB5D2Q8WUJ1 264 aa24.19■■□□□ 1.46
COL27A1-208ENST00000494780 ZCCHC14Q8WYQ9 949 aaKnown RBP24.19■■□□□ 1.46
COL27A1-208ENST00000494780 HSFY1Q96LI6 401 aa24.19■■□□□ 1.46
COL27A1-208ENST00000494780 EIF2B4Q9UI10 523 aaKnown RBP24.19■■□□□ 1.46
COL27A1-208ENST00000494780 P4HA2O15460 535 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 IRAK2O43187 625 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 CER1O95813 267 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 LTFP02788 710 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 ATP5BP06576 529 aaKnown RBP24.18■■□□□ 1.46
COL27A1-208ENST00000494780 DLDP09622 509 aaKnown RBP24.18■■□□□ 1.46
COL27A1-208ENST00000494780 ZNF883P0CG24 379 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 SLC11A2P49281 568 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 SGSHP51688 502 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 ZBTB16Q05516 673 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 RING1Q06587 406 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 CETN1Q12798 172 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 PTPRNQ16849 979 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 CCDC40Q4G0X9 1142 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 MBLAC2Q68D91 279 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 FAM124AQ86V42 546 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 PPM1KQ8N3J5 372 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 C1orf216Q8TAB5 229 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 GOLGA1Q92805 767 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 AZIN2Q96A70 460 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 ZSWIM1Q9BR11 485 aa24.18■■□□□ 1.46
COL27A1-208ENST00000494780 MUC22E2RYF6 1773 aaPredicted RBP24.18■■□□□ 1.46
COL27A1-208ENST00000494780 M0QYV0 167 aa24.17■■□□□ 1.46
COL27A1-208ENST00000494780 RNF225M0QZC1 329 aaPredicted RBP24.17■■□□□ 1.46
COL27A1-208ENST00000494780 ACSL4O60488 711 aa24.17■■□□□ 1.46
COL27A1-208ENST00000494780 FBXO21O94952 628 aa24.17■■□□□ 1.46
COL27A1-208ENST00000494780 PIK3R6Q5UE93 754 aa24.17■■□□□ 1.46
COL27A1-208ENST00000494780 ELOA2Q8IYF1 753 aaPredicted RBP24.17■■□□□ 1.46
COL27A1-208ENST00000494780 GAREM1Q9H706 876 aa24.17■■□□□ 1.46
COL27A1-208ENST00000494780 CFAP47Q6ZTR5 3102 aa24.17■■□□□ 1.46
COL27A1-208ENST00000494780 FAM208BQ5VWN6 2430 aa24.16■■□□□ 1.46
COL27A1-208ENST00000494780 AKAP13Q12802 2813 aa24.16■■□□□ 1.46
COL27A1-208ENST00000494780 SRRM3A6NNA2 597 aaPredicted RBP24.16■■□□□ 1.46
COL27A1-208ENST00000494780 PIK3R2O00459 728 aa24.16■■□□□ 1.46
COL27A1-208ENST00000494780 TBL1XO60907 577 aa24.16■■□□□ 1.46
COL27A1-208ENST00000494780 POLR2EP19388 210 aaKnown RBP24.16■■□□□ 1.46
COL27A1-208ENST00000494780 BRD2P25440 801 aaKnown RBP24.16■■□□□ 1.46
COL27A1-208ENST00000494780 MATKP42679 507 aa24.16■■□□□ 1.46
COL27A1-208ENST00000494780 TBX4P57082 545 aa24.16■■□□□ 1.46
COL27A1-208ENST00000494780 BNC1Q01954 994 aa24.16■■□□□ 1.46
COL27A1-208ENST00000494780 FAM133BQ5BKY9 247 aaKnown RBP24.16■■□□□ 1.46
COL27A1-208ENST00000494780 RFWD3Q6PCD5 774 aa24.16■■□□□ 1.46
COL27A1-208ENST00000494780 ZNF366Q8N895 744 aa24.16■■□□□ 1.46
COL27A1-208ENST00000494780 LMO3Q8TAP4 145 aa24.16■■□□□ 1.46
COL27A1-208ENST00000494780 ADAMTS14Q8WXS8 1223 aa24.16■■□□□ 1.46
COL27A1-208ENST00000494780 KAT5Q92993 513 aa24.16■■□□□ 1.46
COL27A1-208ENST00000494780 PRSS16Q9NQE7 514 aa24.16■■□□□ 1.46
COL27A1-208ENST00000494780 SUN2Q9UH99 717 aa24.16■■□□□ 1.46
COL27A1-208ENST00000494780 GOLGA6L7A0A1B0GV03 622 aa24.15■■□□□ 1.46
COL27A1-208ENST00000494780 CBFA2T3O75081 653 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms