RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 AWAT1Q58HT5 328 aa5.04□□□□□ -1.6
SMC4-224ENST00000494612 AARS2Q5JTZ9 985 aaKnown RBP5.04□□□□□ -1.6
SMC4-224ENST00000494612 ZNF626Q68DY1 528 aa5.04□□□□□ -1.6
SMC4-224ENST00000494612 NFRKBQ6P4R8 1299 aa5.04□□□□□ -1.6
SMC4-224ENST00000494612 SLC29A4Q7RTT9 530 aa5.04□□□□□ -1.6
SMC4-224ENST00000494612 TRABD2AQ86V40 505 aa5.04□□□□□ -1.6
SMC4-224ENST00000494612 TERB1Q8NA31 727 aa5.04□□□□□ -1.6
SMC4-224ENST00000494612 TRIM36Q9NQ86 728 aa5.04□□□□□ -1.6
SMC4-224ENST00000494612 SERGEFQ9UGK8 458 aa5.04□□□□□ -1.6
SMC4-224ENST00000494612 FEM1BQ9UK73 627 aa5.04□□□□□ -1.6
SMC4-224ENST00000494612 TRPC5Q9UL62 973 aaPredicted RBP5.04□□□□□ -1.6
SMC4-224ENST00000494612 BTBD3Q9Y2F9 522 aa5.04□□□□□ -1.6
SMC4-224ENST00000494612 AGAP5A6NIR3 686 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 SMIM22K7EJ46 135 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 FYB1O15117 783 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 MYCLP12524 364 aaPredicted RBP5.03□□□□□ -1.6
SMC4-224ENST00000494612 ADD2P35612 726 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 IGHMBP2P38935 993 aaKnown RBP5.03□□□□□ -1.6
SMC4-224ENST00000494612 CCT5P48643 541 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 AARSP49588 968 aaKnown RBP eCLIP5.03□□□□□ -1.6
SMC4-224ENST00000494612 FAM3BP58499 235 aaPredicted RBP5.03□□□□□ -1.6
SMC4-224ENST00000494612 GPC5P78333 572 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 RAE1P78406 368 aaKnown RBP5.03□□□□□ -1.6
SMC4-224ENST00000494612 DNASE1L3Q13609 305 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 TAF12Q16514 161 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 GALNTL6Q49A17 601 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 SERPINA13PQ6UXR4 307 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 RAB11FIP2Q7L804 512 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 C2CD5Q86YS7 1000 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 ANKRD18AQ8IVF6 992 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 CLASRPQ8N2M8 674 aaKnown RBP5.03□□□□□ -1.6
SMC4-224ENST00000494612 C12orf76Q8N812 135 aaPredicted RBP5.03□□□□□ -1.6
SMC4-224ENST00000494612 PNPLA1Q8N8W4 532 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 MAFAQ8NHW3 353 aaPredicted RBP5.03□□□□□ -1.6
SMC4-224ENST00000494612 GCC1Q96CN9 775 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 HS6ST2Q96MM7 605 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 COG8Q96MW5 612 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 ELOVL1Q9BW60 279 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 SAYSD1Q9NPB0 183 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 C9orf78Q9NZ63 289 aaPredicted RBP5.03□□□□□ -1.6
SMC4-224ENST00000494612 SLC12A4Q9UP95 1085 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 PCDHA10Q9Y5I2 948 aa5.03□□□□□ -1.6
SMC4-224ENST00000494612 TARM1B6A8C7 271 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 ZNF213O14771 459 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 CYP2D6P10635 497 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 KELP23276 732 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 CST5P28325 142 aaPredicted RBP5.02□□□□□ -1.61
SMC4-224ENST00000494612 SERPINA4P29622 427 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 RBM5P52756 815 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMC4-224ENST00000494612 AAK1Q2M2I8 961 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 ADCK5Q3MIX3 580 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 TMEM119Q4V9L6 283 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 KLHL22Q53GT1 634 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 LCE1EQ5T753 118 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 ACSM6Q6P461 480 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 RFX8Q6ZV50 586 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 RASGRP2Q7LDG7 609 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 SFTPA1Q8IWL2 248 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMC4-224ENST00000494612 OR6Y1Q8NGX8 325 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 CPT1BQ92523 772 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 NPIPB3Q92617 1050 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 UBXN10Q96LJ8 280 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 EIF2AK1Q9BQI3 630 aaKnown RBP5.02□□□□□ -1.61
SMC4-224ENST00000494612 THAP7Q9BT49 309 aaPredicted RBP5.02□□□□□ -1.61
SMC4-224ENST00000494612 DDX23Q9BUQ8 820 aaKnown RBP5.02□□□□□ -1.61
SMC4-224ENST00000494612 CINPQ9BW66 212 aaPredicted RBP5.02□□□□□ -1.61
SMC4-224ENST00000494612 SEMA4CQ9C0C4 833 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 RMI1Q9H9A7 625 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 TFCP2L1Q9NZI6 479 aa5.02□□□□□ -1.61
SMC4-224ENST00000494612 C19orf53Q9UNZ5 99 aaPredicted RBP5.02□□□□□ -1.61
SMC4-224ENST00000494612 TBC1D3DA0A087WVF3 549 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 TBC1D3IA0A087WXS9 549 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 TBC1D3EA0A087X179 549 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 TBC1D3KA0A087X1G2 549 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 LOC105369274A0A096LPK9 316 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 LOC102723532A0A0G2JNH3 316 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 TBC1D3BA6NDS4 549 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 TBC1D3FA6NER0 549 aaPredicted RBP5.01□□□□□ -1.61
SMC4-224ENST00000494612 SLC38A8A6NNN8 435 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 EFCAB8A8MWE9 144 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 TBC1D3LB9A6J9 549 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 CLIC1O00299 241 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 TJP3O95049 919 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 AGR2O95994 175 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 MBPP02686 304 aaPredicted RBP5.01□□□□□ -1.61
SMC4-224ENST00000494612 POLBP06746 335 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 CYP21A2P08686 494 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 TBC1D3HP0C7X1 549 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 CKMT1AP12532 417 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 APEHP13798 732 aaKnown RBP5.01□□□□□ -1.61
SMC4-224ENST00000494612 HSD3B1P14060 373 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 MMP8P22894 467 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 VPS41P49754 854 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 JAK3P52333 1124 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 RPL15P61313 204 aaKnown RBP5.01□□□□□ -1.61
SMC4-224ENST00000494612 GAB1Q13480 694 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 MFSD13AQ14CX5 517 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 DENND2CQ68D51 928 aa5.01□□□□□ -1.61
SMC4-224ENST00000494612 TBC1D3GQ6DHY5 549 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms