RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 TSSK4Q6SA08 328 aa24.31■■□□□ 1.48
CLIC3-203ENST00000494426 ATP6V0D2Q8N8Y2 350 aa24.31■■□□□ 1.48
CLIC3-203ENST00000494426 C3orf20Q8ND61 904 aa24.31■■□□□ 1.48
CLIC3-203ENST00000494426 RPLP0P6Q8NHW5 317 aa24.31■■□□□ 1.48
CLIC3-203ENST00000494426 USP33Q8TEY7 942 aa24.31■■□□□ 1.48
CLIC3-203ENST00000494426 RXFP2Q8WXD0 754 aa24.31■■□□□ 1.48
CLIC3-203ENST00000494426 PRICKLE1Q96MT3 831 aaPredicted RBP24.31■■□□□ 1.48
CLIC3-203ENST00000494426 PRMT1Q99873 361 aaKnown RBP24.31■■□□□ 1.48
CLIC3-203ENST00000494426 IRX2Q9BZI1 471 aaPredicted RBP24.31■■□□□ 1.48
CLIC3-203ENST00000494426 BZW2Q9Y6E2 419 aaKnown RBP24.31■■□□□ 1.48
CLIC3-203ENST00000494426 TBC1D3BA6NDS4 549 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 C2CD4BA6NLJ0 364 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 SIGLEC16A6NMB1 481 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 PRRT4C9JH25 899 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 I6L893 689 aaPredicted RBP24.3■■□□□ 1.48
CLIC3-203ENST00000494426 ENDOD1O94919 500 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 SP9P0CG40 484 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 SLC2A3P11169 496 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 KRT3P12035 628 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 TDGF1P13385 188 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 RRM1P23921 792 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 HNRNPH3P31942 346 aaKnown RBP24.3■■□□□ 1.48
CLIC3-203ENST00000494426 RFC1P35251 1148 aaPredicted RBP24.3■■□□□ 1.48
CLIC3-203ENST00000494426 CXCL12P48061 93 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 CCR3P51677 355 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 CCDC14Q49A88 953 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 RAB6CQ53S08 254 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 MS4A13Q5J8X5 152 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 PPP1R15BQ5SWA1 713 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 RAP1GAP2Q684P5 730 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 RNF34Q969K3 372 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 VCPIP1Q96JH7 1222 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 SELENOOQ9BVL4 669 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 RAB6CQ9H0N0 254 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 FBXO4Q9UKT5 387 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 SLC27A6Q9Y2P4 619 aa24.3■■□□□ 1.48
CLIC3-203ENST00000494426 ADCY5O95622 1261 aa24.29■■□□□ 1.48
CLIC3-203ENST00000494426 F9P00740 461 aa24.29■■□□□ 1.48
CLIC3-203ENST00000494426 FTLP02792 175 aaPredicted RBP24.29■■□□□ 1.48
CLIC3-203ENST00000494426 PDGFRAP16234 1089 aa24.29■■□□□ 1.48
CLIC3-203ENST00000494426 TACR2P21452 398 aa24.29■■□□□ 1.48
CLIC3-203ENST00000494426 CSTF1Q05048 431 aaKnown RBP24.29■■□□□ 1.48
CLIC3-203ENST00000494426 DEUP1Q05D60 604 aa24.29■■□□□ 1.48
CLIC3-203ENST00000494426 TRIM14Q14142 442 aa24.29■■□□□ 1.48
CLIC3-203ENST00000494426 ARID5BQ14865 1188 aa24.29■■□□□ 1.48
CLIC3-203ENST00000494426 PREPLQ4J6C6 727 aaPredicted RBP24.29■■□□□ 1.48
CLIC3-203ENST00000494426 C2orf27AQ580R0 203 aa24.29■■□□□ 1.48
CLIC3-203ENST00000494426 TDRD12Q587J7 1177 aaKnown RBP24.29■■□□□ 1.48
CLIC3-203ENST00000494426 WDR59Q6PJI9 974 aa24.29■■□□□ 1.48
CLIC3-203ENST00000494426 DDX50Q9BQ39 737 aaKnown RBP24.29■■□□□ 1.48
CLIC3-203ENST00000494426 SLC2A11Q9BYW1 496 aa24.29■■□□□ 1.48
CLIC3-203ENST00000494426 TRIM5Q9C035 493 aa24.29■■□□□ 1.48
CLIC3-203ENST00000494426 ARHGEF38Q9NXL2 777 aa24.29■■□□□ 1.48
CLIC3-203ENST00000494426 ARHGAP20Q9P2F6 1191 aa24.29■■□□□ 1.48
CLIC3-203ENST00000494426 SLC12A6Q9UHW9 1150 aa24.29■■□□□ 1.48
CLIC3-203ENST00000494426 K7ESF4 209 aa24.28■■□□□ 1.48
CLIC3-203ENST00000494426 TBL1XO60907 577 aa24.28■■□□□ 1.48
CLIC3-203ENST00000494426 ATG13O75143 517 aa24.28■■□□□ 1.48
CLIC3-203ENST00000494426 PAPSS2O95340 614 aaPredicted RBP24.28■■□□□ 1.48
CLIC3-203ENST00000494426 ABCB4P21439 1286 aa24.28■■□□□ 1.48
CLIC3-203ENST00000494426 RPS24P62847 133 aaKnown RBP24.28■■□□□ 1.48
CLIC3-203ENST00000494426 MRPS21P82921 87 aaKnown RBP24.28■■□□□ 1.48
CLIC3-203ENST00000494426 TBX2Q13207 712 aaPredicted RBP24.28■■□□□ 1.48
CLIC3-203ENST00000494426 GEN1Q17RS7 908 aa24.28■■□□□ 1.48
CLIC3-203ENST00000494426 C15orf59Q2T9L4 293 aaPredicted RBP24.28■■□□□ 1.48
CLIC3-203ENST00000494426 C10orf76Q5T2E6 689 aa24.28■■□□□ 1.48
CLIC3-203ENST00000494426 MPP7Q5T2T1 576 aa24.28■■□□□ 1.48
CLIC3-203ENST00000494426 SH3PXD2AQ5TCZ1 1133 aa24.28■■□□□ 1.48
CLIC3-203ENST00000494426 PPP1R2P3Q6NXS1 205 aa24.28■■□□□ 1.48
CLIC3-203ENST00000494426 DNAJC7Q99615 494 aa24.28■■□□□ 1.48
CLIC3-203ENST00000494426 ISCUQ9H1K1 167 aa24.28■■□□□ 1.48
CLIC3-203ENST00000494426 WDCPQ9H6R7 721 aa24.28■■□□□ 1.48
CLIC3-203ENST00000494426 ZDHHC4Q9NPG8 344 aa24.28■■□□□ 1.48
CLIC3-203ENST00000494426 ADAMTS1Q9UHI8 967 aa24.28■■□□□ 1.48
CLIC3-203ENST00000494426 STARD13Q9Y3M8 1113 aa24.28■■□□□ 1.48
CLIC3-203ENST00000494426 RTN2O75298 545 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 TIE1P35590 1138 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 PTPN9P43378 593 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 RPL7AP62424 266 aaKnown RBP24.27■■□□□ 1.48
CLIC3-203ENST00000494426 ATP11AP98196 1134 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 BRMS1LQ5PSV4 323 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 DNAJC24Q6P3W2 148 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 CHSY1Q86X52 802 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 DRC7Q8IY82 874 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 LGI2Q8N0V4 545 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 CFAP52Q8N1V2 620 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 CCDC26Q8TAB7 109 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 WFDC5Q8TCV5 224 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 CENPIQ92674 756 aaPredicted RBP24.27■■□□□ 1.48
CLIC3-203ENST00000494426 NELL1Q92832 810 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 TKTL2Q9H0I9 626 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 TMPRSS4Q9NRS4 437 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 HS3ST4Q9Y661 456 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 MUC6Q6W4X9 2439 aa24.27■■□□□ 1.48
CLIC3-203ENST00000494426 A0A087X0T9 212 aa24.26■■□□□ 1.47
CLIC3-203ENST00000494426 PAGE1O75459 146 aa24.26■■□□□ 1.47
CLIC3-203ENST00000494426 FAM228BP0C875 321 aa24.26■■□□□ 1.47
CLIC3-203ENST00000494426 SDC4P31431 198 aa24.26■■□□□ 1.47
CLIC3-203ENST00000494426 RDXP35241 583 aaKnown RBP24.26■■□□□ 1.47
CLIC3-203ENST00000494426 NHLH1Q02575 133 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms