RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 FAM90A2PQ658T7 463 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 GRHL2Q6ISB3 625 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 CCDC144NLQ6NUI1 221 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 WDR93Q6P2C0 686 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 CCDC174Q6PII3 467 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 LVRNQ6Q4G3 990 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 LRIG3Q6UXM1 1119 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 CHSY1Q86X52 802 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 ANKRD13BQ86YJ7 626 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 ANKRD18AQ8IVF6 992 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 SRRM1Q8IYB3 904 aaKnown RBP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 LINC01465Q8N7H1 131 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 ATG16L2Q8NAA4 619 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 MPLKIPQ8TAP9 179 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 NOC3LQ8WTT2 800 aaKnown RBP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 STYXQ8WUJ0 223 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 CPT1BQ92523 772 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 AKAP1Q92667 903 aaKnown RBP eCLIP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 RSC1A1Q92681 617 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 REPS1Q96D71 796 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 MPP4Q96JB8 637 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 C5orf34Q96MH7 638 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 RMDN3Q96TC7 470 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 TP63Q9H3D4 680 aaPredicted RBP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 ZHX3Q9H4I2 956 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 PRDM13Q9H4Q3 707 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 DACT1Q9NYF0 836 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 C9orf78Q9NZ63 289 aaPredicted RBP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 BCCIPQ9P287 314 aaKnown RBP eCLIP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 PDP2Q9P2J9 529 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 SERGEFQ9UGK8 458 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 BAG5Q9UL15 447 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 ASAP1Q9ULH1 1129 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 FZD4Q9ULV1 537 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 FRMD4BQ9Y2L6 1034 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 PCDHGB3Q9Y5G1 929 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 LRRFIP2Q9Y608 721 aaKnown RBP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 CYP2D7A0A087X1C5 515 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 MYMKA6NI61 221 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 ACKR2O00590 384 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 TRIM38O00635 465 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 FCHO1O14526 889 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 DNPH1O43598 174 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 TAF5LO75529 589 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 TNFRSF6BO95407 300 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 BMP15O95972 392 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 CELA2AP08217 269 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 PRR35P0CG20 571 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 APEHP13798 732 aaKnown RBP2.69□□□□□ -1.98
LMNB1-207ENST00000494185 LMO1P25800 156 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 AKT1P31749 480 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 GALNSP34059 522 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 SERPINF1P36955 418 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 PCP4P48539 62 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 CCT4P50991 539 aaKnown RBP2.69□□□□□ -1.98
LMNB1-207ENST00000494185 OAZ1P54368 228 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 GPC5P78333 572 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 GALNT1Q10472 559 aaPredicted RBP2.69□□□□□ -1.98
LMNB1-207ENST00000494185 FOXD4Q12950 439 aaPredicted RBP2.69□□□□□ -1.98
LMNB1-207ENST00000494185 SLC18B1Q6NT16 456 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 RINT1Q6NUQ1 792 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 KLHL17Q6TDP4 642 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 PIK3AP1Q6ZUJ8 805 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 RAB11FIP2Q7L804 512 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 TRAPPC11Q7Z392 1133 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 YTHDF3Q7Z739 585 aaKnown RBP2.69□□□□□ -1.98
LMNB1-207ENST00000494185 CACNA2D3Q8IZS8 1091 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 MYCT1Q8N699 235 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 C8orf58Q8NAV2 365 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 NAXEQ8NCW5 288 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 PPHLN1Q8NEY8 458 aaKnown RBP2.69□□□□□ -1.98
LMNB1-207ENST00000494185 TRAPPC12Q8WVT3 735 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 GLMPQ8WWB7 406 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 PIGKQ92643 395 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 EID2BQ96D98 161 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 EDC3Q96F86 508 aaKnown RBP2.69□□□□□ -1.98
LMNB1-207ENST00000494185 HMCESQ96FZ2 354 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 REXO5Q96IC2 774 aaKnown RBP2.69□□□□□ -1.98
LMNB1-207ENST00000494185 RITA1Q96K30 269 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 PPM1MQ96MI6 270 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 TUBB6Q9BUF5 446 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 EFHD1Q9BUP0 239 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 KATNAL1Q9BW62 490 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 TMEM120AQ9BXJ8 343 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 PRSS22Q9GZN4 317 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 CDCP1Q9H5V8 836 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 SAP30LQ9HAJ7 183 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 FSCN3Q9NQT6 498 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 VPS45Q9NRW7 570 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 ASIC5Q9NY37 505 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 HERC5Q9UII4 1024 aaKnown RBP2.69□□□□□ -1.98
LMNB1-207ENST00000494185 ZBTB1Q9Y2K1 713 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 PCDHB2Q9Y5E7 798 aa2.69□□□□□ -1.98
LMNB1-207ENST00000494185 HEMK1Q9Y5R4 338 aaPredicted RBP2.69□□□□□ -1.98
LMNB1-207ENST00000494185 AOX1Q06278 1338 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 EMSYQ7Z589 1322 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 COL11A2P13942 1736 aaPredicted RBP2.68□□□□□ -1.98
LMNB1-207ENST00000494185 TBC1D3DA0A087WVF3 549 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 TBC1D3IA0A087WXS9 549 aa2.68□□□□□ -1.98
LMNB1-207ENST00000494185 TBC1D3EA0A087X179 549 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms