RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 SPACA7Q96KW9 195 aa8.89□□□□□ -0.99
LRCH3-219ENST00000494069 FCRL2Q96LA5 508 aaPredicted RBP8.89□□□□□ -0.99
LRCH3-219ENST00000494069 PRICKLE1Q96MT3 831 aaPredicted RBP8.89□□□□□ -0.99
LRCH3-219ENST00000494069 EDEM2Q9BV94 578 aa8.89□□□□□ -0.99
LRCH3-219ENST00000494069 SLC4A5Q9BY07 1137 aa8.89□□□□□ -0.99
LRCH3-219ENST00000494069 CIPCQ9C0C6 399 aa8.89□□□□□ -0.99
LRCH3-219ENST00000494069 MKRN2Q9H000 416 aaKnown RBP8.89□□□□□ -0.99
LRCH3-219ENST00000494069 THAP10Q9P2Z0 257 aaPredicted RBP8.89□□□□□ -0.99
LRCH3-219ENST00000494069 XPO7Q9UIA9 1087 aaKnown RBP8.89□□□□□ -0.99
LRCH3-219ENST00000494069 NUP205Q92621 2012 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 C4orf47A7E2U8 309 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 KHNYNO15037 678 aaKnown RBP8.88□□□□□ -0.99
LRCH3-219ENST00000494069 ACSL4O60488 711 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 FOXD2O60548 495 aaPredicted RBP8.88□□□□□ -0.99
LRCH3-219ENST00000494069 TBL1XO60907 577 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 FBXO21O94952 628 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 HLA-EP13747 358 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 CD70P32970 193 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 RPS24P62847 133 aaKnown RBP8.88□□□□□ -0.99
LRCH3-219ENST00000494069 RPL6Q02878 288 aaKnown RBP8.88□□□□□ -0.99
LRCH3-219ENST00000494069 EXOC3L4Q17RC7 722 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 MIIPQ5JXC2 388 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 PIK3R6Q5UE93 754 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 LYSMD4Q5XG99 296 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 RNF43Q68DV7 783 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 IL31Q6EBC2 164 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 ANKS1BQ7Z6G8 1248 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 TMEM110Q86TL2 294 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 ADIPOR2Q86V24 386 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 CACUL1Q86Y37 369 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 SLC41A1Q8IVJ1 513 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 SHC3Q92529 594 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 LMLNQ96KR4 655 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 NUCKS1Q9H1E3 243 aaKnown RBP8.88□□□□□ -0.99
LRCH3-219ENST00000494069 SAMSN1Q9NSI8 373 aaKnown RBP8.88□□□□□ -0.99
LRCH3-219ENST00000494069 LMBRD1Q9NUN5 540 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 ABCB8Q9NUT2 735 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 STIM2Q9P246 746 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 APEX2Q9UBZ4 518 aa8.88□□□□□ -0.99
LRCH3-219ENST00000494069 KCNJ18B7U540 433 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 FOXN3O00409 490 aaPredicted RBP8.87□□□□□ -0.99
LRCH3-219ENST00000494069 GIPC1O14908 333 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 MED7O43513 233 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 LATS1O95835 1130 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 MOCS2O96007 188 aaPredicted RBP8.87□□□□□ -0.99
LRCH3-219ENST00000494069 ADRB1P08588 477 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 PABPC1P11940 636 aaKnown RBP8.87□□□□□ -0.99
LRCH3-219ENST00000494069 MAOBP27338 520 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 ACADSBP45954 432 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 MAPK8P45983 427 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 SLC11A2P49281 568 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 NUMBP49757 651 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 COPAP53621 1224 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 ZNF33AQ06730 810 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 KCNMA1Q12791 1236 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 PDCLQ13371 301 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 BYSLQ13895 437 aaKnown RBP8.87□□□□□ -0.99
LRCH3-219ENST00000494069 MAN2A1Q16706 1144 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 PTPRNQ16849 979 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 TPD52L1Q16890 204 aaPredicted RBP8.87□□□□□ -0.99
LRCH3-219ENST00000494069 VWA3BQ502W6 1294 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 ZC3H12AQ5D1E8 599 aaKnown RBP8.87□□□□□ -0.99
LRCH3-219ENST00000494069 TRIM61Q5EBN2 209 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 FSCBQ5H9T9 825 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 N4BP2L1Q5TBK1 243 aaPredicted RBP8.87□□□□□ -0.99
LRCH3-219ENST00000494069 MMS22LQ6ZRQ5 1243 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 CHST9Q7L1S5 443 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 ENOSF1Q7L5Y1 443 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 KIAA0907Q7Z7F0 614 aaPredicted RBP8.87□□□□□ -0.99
LRCH3-219ENST00000494069 SLC47A2Q86VL8 602 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 TMPRSS6Q8IU80 811 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 SYT12Q8IV01 421 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 UNC45BQ8IWX7 931 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 CFAP52Q8N1V2 620 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 OR2I1PQ8NGU4 316 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 STK32AQ8WU08 396 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 UCMAQ8WVF2 138 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 GOLGA1Q92805 767 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 SLC39A13Q96H72 371 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 HSPA12BQ96MM6 686 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 CPXM1Q96SM3 734 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 TUBGCP2Q9BSJ2 902 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 LSM14BQ9BX40 385 aaKnown RBP8.87□□□□□ -0.99
LRCH3-219ENST00000494069 SLC2A11Q9BYW1 496 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 NUP62CLQ9H1M0 184 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 MTG2Q9H4K7 406 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 THAP9Q9H5L6 903 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 PLCB1Q9NQ66 1216 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 GGA2Q9UJY4 613 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 DNAJC12Q9UKB3 198 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 PILRBQ9UKJ0 227 aa8.87□□□□□ -0.99
LRCH3-219ENST00000494069 INTS6Q9UL03 887 aaKnown RBP8.87□□□□□ -0.99
LRCH3-219ENST00000494069 CNOT1A5YKK6 2376 aaKnown RBP8.87□□□□□ -0.99
LRCH3-219ENST00000494069 TNRC6BQ9UPQ9 1833 aaKnown RBP8.87□□□□□ -0.99
LRCH3-219ENST00000494069 PLXND1Q9Y4D7 1925 aa8.86□□□□□ -0.99
LRCH3-219ENST00000494069 GTPBP10A4D1E9 387 aaKnown RBP8.86□□□□□ -0.99
LRCH3-219ENST00000494069 CAPN9O14815 690 aa8.86□□□□□ -0.99
LRCH3-219ENST00000494069 ZBTB24O43167 697 aaPredicted RBP8.86□□□□□ -0.99
LRCH3-219ENST00000494069 AP5Z1O43299 807 aa8.86□□□□□ -0.99
LRCH3-219ENST00000494069 SYNCRIPO60506 623 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms