RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 CRACR2AQ9BSW2 395 aa13.95□□□□□ -0.18
CTDSP1-212ENST00000494067 TRIM62Q9BVG3 475 aa13.95□□□□□ -0.18
CTDSP1-212ENST00000494067 GTPBP2Q9BX10 602 aaKnown RBP13.95□□□□□ -0.18
CTDSP1-212ENST00000494067 IRX2Q9BZI1 471 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-212ENST00000494067 STOML2Q9UJZ1 356 aa13.95□□□□□ -0.18
CTDSP1-212ENST00000494067 NYNRINQ9P2P1 1898 aaKnown RBP13.95□□□□□ -0.18
CTDSP1-212ENST00000494067 MEI4A8MW99 385 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 KCNJ18B7U540 433 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 GIPC1O14908 333 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 IRAK2O43187 625 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 LTFP02788 710 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 ATP5BP06576 529 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 EPHX1P07099 455 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 KRT5P13647 590 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 SLC9A1P19634 815 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 PMLP29590 882 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 HLA-FP30511 346 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 ACADSBP45954 432 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 UBE2HP62256 183 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 PITX1P78337 314 aaPredicted RBP13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 ZNF252P-AS1Q0IIN9 211 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 FAM133BQ5BKY9 247 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 PEAR1Q5VY43 1037 aaPredicted RBP13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 DPY19L2P1Q6NXN4 242 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 RFWD3Q6PCD5 774 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 TMPRSS6Q8IU80 811 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 AHI1Q8N157 1196 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 ZNF419Q96HQ0 510 aaPredicted RBP13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 PRICKLE1Q96MT3 831 aaPredicted RBP13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 MKRN2Q9H000 416 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 MIS12Q9H081 205 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 SIX2Q9NPC8 291 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 UBE2TQ9NPD8 197 aaPredicted RBP13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 ITM2CQ9NQX7 267 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 ST7Q9NRC1 585 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 RWDD2AQ9UIY3 292 aa13.94□□□□□ -0.18
CTDSP1-212ENST00000494067 CAPN9O14815 690 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 OPHN1O60890 802 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 PNMA6AP0CW24 399 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 NCAM1P13591 858 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 COPAP53621 1224 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 TBX4P57082 545 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 SHC2P98077 582 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 RING1Q06587 406 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 ST3GAL2Q16842 350 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 PLEKHG6Q3KR16 790 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 FNDC3BQ53EP0 1204 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 MPP7Q5T2T1 576 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 SYPL2Q5VXT5 272 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 TRIM65Q6PJ69 517 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 CHST9Q7L1S5 443 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 ENOSF1Q7L5Y1 443 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 SCUBE3Q8IX30 993 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 ADAM32Q8TC27 787 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 DQX1Q8TE96 717 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 SERPINB11Q96P15 392 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 NUP58Q9BVL2 599 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 XPO7Q9UIA9 1087 aaKnown RBP13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 NAALADL1Q9UQQ1 740 aa13.93□□□□□ -0.18
CTDSP1-212ENST00000494067 ARHGAP33O14559 1287 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 PAPSS1O43252 624 aaPredicted RBP13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 HLA-EP13747 358 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 POLR2EP19388 210 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 CD70P32970 193 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 TAF5Q15542 800 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 KIAA0907Q7Z7F0 614 aaPredicted RBP13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 ADIPOR2Q86V24 386 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 CACUL1Q86Y37 369 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 WDTC1Q8N5D0 677 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 ZNF366Q8N895 744 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 CADM4Q8NFZ8 388 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 CYB5D2Q8WUJ1 264 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 AZIN2Q96A70 460 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 FAM149B1Q96BN6 582 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 TOE1Q96GM8 510 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 LMLNQ96KR4 655 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 FCRL2Q96LA5 508 aaPredicted RBP13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 SLC4A5Q9BY07 1137 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 FBRSQ9HAH7 460 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 ABCB8Q9NUT2 735 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 WSB2Q9NYS7 404 aaPredicted RBP13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 USP36Q9P275 1121 aaKnown RBP13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 GGA2Q9UJY4 613 aa13.92□□□□□ -0.18
CTDSP1-212ENST00000494067 E5RJQ4 531 aa13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 ACSL4O60488 711 aa13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 TBL1XO60907 577 aa13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 LETM1O95202 739 aaPredicted RBP13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 PABPC1P11940 636 aaKnown RBP13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 TPMTP51580 245 aa13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 ST8SIA6P61647 398 aa13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 FOXC1Q12948 553 aa13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 HNRNPDQ14103 355 aaKnown RBP13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 PTPRNQ16849 979 aa13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 TPD52L1Q16890 204 aaPredicted RBP13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 DPCR1Q3MIW9 517 aa13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 PIK3R6Q5UE93 754 aa13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 TAC4Q86UU9 113 aa13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 MFN1Q8IWA4 741 aa13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.91□□□□□ -0.18
CTDSP1-212ENST00000494067 DEFB124Q8NES8 71 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms