RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 NUCKS1Q9H1E3 243 aaKnown RBP16.77■□□□□ 0.28
SATB1-217ENST00000493952 SEMA4AQ9H3S1 761 aa16.77■□□□□ 0.28
SATB1-217ENST00000493952 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.77■□□□□ 0.28
SATB1-217ENST00000493952 CALCOCO1Q9P1Z2 691 aa16.77■□□□□ 0.28
SATB1-217ENST00000493952 MYO6Q9UM54 1294 aa16.77■□□□□ 0.28
SATB1-217ENST00000493952 M0QYT0 321 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 TFE3P19532 575 aaPredicted RBP16.76■□□□□ 0.27
SATB1-217ENST00000493952 GBP1P32455 592 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 FLT3P36888 993 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 CENPCQ03188 943 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 SRSF5Q13243 272 aaKnown RBP16.76■□□□□ 0.27
SATB1-217ENST00000493952 CRY1Q16526 586 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 CLEC16AQ2KHT3 1053 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 EOGTQ5NDL2 527 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 TMEM92Q6UXU6 159 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 WDR5BQ86VZ2 330 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 KCNV2Q8TDN2 545 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 BTN2A3PQ96KV6 586 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 ACOX2Q99424 681 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 NPY6RQ99463 290 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 AGPAT1Q99943 283 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 IRX2Q9BZI1 471 aaPredicted RBP16.76■□□□□ 0.27
SATB1-217ENST00000493952 SEPT11Q9NVA2 429 aaKnown RBP16.76■□□□□ 0.27
SATB1-217ENST00000493952 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.76■□□□□ 0.27
SATB1-217ENST00000493952 TMEM59LQ9UK28 342 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 OTOGLQ3ZCN5 2332 aa16.76■□□□□ 0.27
SATB1-217ENST00000493952 FAM186AA6NE01 2351 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 KCNU1A8MYU2 1149 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 TBL1XO60907 577 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 APBB3O95704 486 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 LMNAP02545 664 aaKnown RBP16.75■□□□□ 0.27
SATB1-217ENST00000493952 HLA-FP30511 346 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 CCR1P32246 355 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 PBX1P40424 430 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 SULT1E1P49888 294 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 UBASH3AP57075 661 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 NME3Q13232 169 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 MS4A13Q5J8X5 152 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 E4F1Q66K89 784 aaPredicted RBP16.75■□□□□ 0.27
SATB1-217ENST00000493952 RAP1GAP2Q684P5 730 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 RNF43Q68DV7 783 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 TRNP1Q6NT89 227 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 LRSAM1Q6UWE0 723 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 ANKS1BQ7Z6G8 1248 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 PHLDB2Q86SQ0 1253 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 ATP6V0D2Q8N8Y2 350 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 HJURPQ8NCD3 748 aaPredicted RBP16.75■□□□□ 0.27
SATB1-217ENST00000493952 TSTD1Q8NFU3 115 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 OLIG1Q8TAK6 271 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 WFDC5Q8TCV5 224 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 NT5C3BQ969T7 300 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 DDX50Q9BQ39 737 aaKnown RBP16.75■□□□□ 0.27
SATB1-217ENST00000493952 SYT11Q9BT88 431 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 EPC1Q9H2F5 836 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 TSPY26PQ9H489 355 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 METTL5Q9NRN9 209 aaKnown RBP16.75■□□□□ 0.27
SATB1-217ENST00000493952 STAP1Q9ULZ2 295 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 ABCA7Q8IZY2 2146 aa16.75■□□□□ 0.27
SATB1-217ENST00000493952 CCDC163A0A0D9SF12 145 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 HRO43593 1189 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 CCDC172P0C7W6 258 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 SLC2A3P11169 496 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 TACR2P21452 398 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 NTSR1P30989 418 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 WASP42768 502 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 NSFP46459 744 aaKnown RBP16.74■□□□□ 0.27
SATB1-217ENST00000493952 DGKEP52429 567 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 RPS24P62847 133 aaKnown RBP16.74■□□□□ 0.27
SATB1-217ENST00000493952 PTP4A2Q12974 167 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 FIGNQ5HY92 759 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 MPP7Q5T2T1 576 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 TMEM215Q68D42 235 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 TRMT11Q7Z4G4 463 aaKnown RBP16.74■□□□□ 0.27
SATB1-217ENST00000493952 CHSY1Q86X52 802 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 PHF13Q86YI8 300 aaPredicted RBP16.74■□□□□ 0.27
SATB1-217ENST00000493952 CHPFQ8IZ52 775 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 CFAP52Q8N1V2 620 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 RNF34Q969K3 372 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 TBCBQ99426 244 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 PRMT1Q99873 361 aaKnown RBP16.74■□□□□ 0.27
SATB1-217ENST00000493952 EDEM3Q9BZQ6 932 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 PIGVQ9NUD9 493 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 RRN3Q9NYV6 651 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 IFNKQ9P0W0 207 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 STIM2Q9P246 746 aa16.74■□□□□ 0.27
SATB1-217ENST00000493952 SMG5Q9UPR3 1016 aaKnown RBP16.74■□□□□ 0.27
SATB1-217ENST00000493952 RIF1Q5UIP0 2472 aaKnown RBP16.74■□□□□ 0.27
SATB1-217ENST00000493952 AXIN1O15169 862 aa16.73■□□□□ 0.27
SATB1-217ENST00000493952 GJB6O95452 261 aa16.73■□□□□ 0.27
SATB1-217ENST00000493952 ABCB4P21439 1286 aa16.73■□□□□ 0.27
SATB1-217ENST00000493952 CNR2P34972 360 aa16.73■□□□□ 0.27
SATB1-217ENST00000493952 ASIC2Q16515 512 aa16.73■□□□□ 0.27
SATB1-217ENST00000493952 SLC25A52Q3SY17 297 aa16.73■□□□□ 0.27
SATB1-217ENST00000493952 SFMBT2Q5VUG0 894 aa16.73■□□□□ 0.27
SATB1-217ENST00000493952 ANO7Q6IWH7 933 aa16.73■□□□□ 0.27
SATB1-217ENST00000493952 MON1BQ7L1V2 547 aa16.73■□□□□ 0.27
SATB1-217ENST00000493952 ARCQ7LC44 396 aa16.73■□□□□ 0.27
SATB1-217ENST00000493952 RASSF3Q86WH2 238 aa16.73■□□□□ 0.27
SATB1-217ENST00000493952 LGI2Q8N0V4 545 aa16.73■□□□□ 0.27
SATB1-217ENST00000493952 EMC1Q8N766 993 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms