RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 MSH2P43246 934 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 IL9RQ01113 521 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 PRPF4BQ13523 1007 aaKnown RBP11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 SETDB1Q15047 1291 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 ENOX2Q16206 610 aaKnown RBP11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 SPRED3Q2MJR0 410 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 WASHC2DQ5SRD0 308 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 FAM171A1Q5VUB5 890 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 LRCH2Q5VUJ6 765 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 RINT1Q6NUQ1 792 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 ANO5Q75V66 913 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 MIER3Q7Z3K6 550 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 ARMC2Q8NEN0 867 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 RDM1Q8NG50 284 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 HASPINQ8TF76 798 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 NSMCE1Q8WV22 266 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 SMARCD2Q92925 531 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 ARHGEF2Q92974 986 aaKnown RBP11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 TMEM143Q96AN5 459 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 FAXDC2Q96IV6 333 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 NACC1Q96RE7 527 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 RIT2Q99578 217 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 PAAF1Q9BRP4 392 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 LRMDAQ9H2I8 198 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 ZHX3Q9H4I2 956 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 OSGEPQ9NPF4 335 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 TMEM9BQ9NQ34 198 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 CTTNBP2NLQ9P2B4 639 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 WRAP73Q9P2S5 460 aaPredicted RBP11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 MTRRQ9UBK8 725 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 FETUBQ9UGM5 382 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 KLK13Q9UKR3 277 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 SNX24Q9Y343 169 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 MYO18BQ8IUG5 2567 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 TMEM120BA0PK00 339 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 CYSRT1A8MQ03 144 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 EML1O00423 815 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 TRAFD1O14545 582 aaPredicted RBP11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 ZNF197O14709 1029 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 PSMD10O75832 226 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 UBOX5O94941 541 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 UNC5CO95185 931 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 SHBGP04278 402 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 CLTAP09496 248 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 IGFBP6P24592 240 aaPredicted RBP11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 OR1D2P34982 312 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 YARSP54577 528 aaKnown RBP11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 MRPS35P82673 323 aaKnown RBP11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 ELAVL2Q12926 359 aaKnown RBP11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 MYO1EQ12965 1108 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 BLMHQ13867 455 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 NAA25Q14CX7 972 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 ZRSR2Q15696 482 aaKnown RBP11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 COL28A1Q2UY09 1125 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 ZC3H12AQ5D1E8 599 aaKnown RBP11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 NOTUMQ6P988 496 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 TXNDC11Q6PKC3 985 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 C19orf48Q6RUI8 117 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 C1orf186Q6ZWK4 172 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 EXOC3L1Q86VI1 746 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 CDR2LQ86X02 465 aaPredicted RBP11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 RALGPS2Q86X27 583 aaPredicted RBP11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 ZNF677Q86XU0 584 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 CCDC89Q8N998 374 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 MDM1Q8TC05 714 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 ALG3Q92685 438 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 KIFAP3Q92845 792 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 TCEAL4Q96EI5 215 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 HSD17B14Q9BPX1 270 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 EIF2AK1Q9BQI3 630 aaKnown RBP11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 STRA6Q9BX79 667 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 TEKT3Q9BXF9 490 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 THAP2Q9H0W7 228 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 CXCL16Q9H2A7 254 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 AGPAT3Q9NRZ7 376 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 KLK14Q9P0G3 267 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 USH1CQ9Y6N9 552 aa11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 URB1O60287 2271 aaKnown RBP11.03□□□□□ -0.64
PDLIM1-205ENST00000493949 TNRC6BQ9UPQ9 1833 aaKnown RBP11.02□□□□□ -0.64
PDLIM1-205ENST00000493949 NPHP3-ACAD11A0A0J9YXS1 232 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 TLDC2A0PJX2 215 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 SPECC1L-ADORA2AF8WAN1 911 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 ZBTB39O15060 712 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 CHADO15335 359 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 PRPF4O43172 522 aaKnown RBP eCLIP11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 THAP12O43422 761 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 EXTL3O43909 919 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 HIP1RO75146 1068 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 SCP2P22307 547 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 AKAP5P24588 427 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 GTF2H1P32780 548 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 CTHP32929 405 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 GCKP35557 465 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 CCR2P41597 374 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 MFAP3P55082 362 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 SH3BGRP55822 239 aaPredicted RBP11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 FCHO2Q0JRZ9 810 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 TUSC3Q13454 348 aa11.02□□□□□ -0.65
PDLIM1-205ENST00000493949 E2F5Q15329 346 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms