RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 LINC00597Q9H2U6 94 aa12.05□□□□□ -0.48
CTSA-209ENST00000493522 ECT2Q9H8V3 914 aa12.05□□□□□ -0.48
CTSA-209ENST00000493522 SEMA4GQ9NTN9 838 aa12.05□□□□□ -0.48
CTSA-209ENST00000493522 DDIT4Q9NX09 232 aa12.05□□□□□ -0.48
CTSA-209ENST00000493522 ADAMTS1Q9UHI8 967 aa12.05□□□□□ -0.48
CTSA-209ENST00000493522 ZNF510Q9Y2H8 683 aa12.05□□□□□ -0.48
CTSA-209ENST00000493522 NYNRINQ9P2P1 1898 aaKnown RBP12.05□□□□□ -0.48
CTSA-209ENST00000493522 A0A087X0T9 212 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.04□□□□□ -0.48
CTSA-209ENST00000493522 ANKRD62A6NC57 917 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 GOLGA6L6A8MZA4 724 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 SPECC1L-ADORA2AF8WAN1 911 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 M0QYT0 321 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 AKR1B10O60218 316 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 GREM1O60565 184 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 MOCS2O96007 188 aaPredicted RBP12.04□□□□□ -0.48
CTSA-209ENST00000493522 IGLV3-27P01718 113 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 FTLP02792 175 aaPredicted RBP12.04□□□□□ -0.48
CTSA-209ENST00000493522 KLKB1P03952 638 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 FAM228BP0C875 321 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 ABCB4P21439 1286 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 RRM1P23921 792 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 CDC25BP30305 580 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 GBP1P32455 592 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 CTHP32929 405 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 RING1Q06587 406 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 GAS6Q14393 721 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 CSRP2Q16527 193 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 PPM1JQ5JR12 505 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 PRR23CQ6ZRP0 262 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 LONP2Q86WA8 852 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 RALGPS2Q86X27 583 aaPredicted RBP12.04□□□□□ -0.48
CTSA-209ENST00000493522 TC2NQ8N9U0 490 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 SPC24Q8NBT2 197 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 JOSD2Q8TAC2 188 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 RNF34Q969K3 372 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 TRIM11Q96F44 468 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 FCRL2Q96LA5 508 aaPredicted RBP12.04□□□□□ -0.48
CTSA-209ENST00000493522 MCEEQ96PE7 176 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 RRN3Q9NYV6 651 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 TMEM59LQ9UK28 342 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 AGO1Q9UL18 857 aaKnown RBP12.04□□□□□ -0.48
CTSA-209ENST00000493522 TLR6Q9Y2C9 796 aa12.04□□□□□ -0.48
CTSA-209ENST00000493522 SSU72P8A0A1W2PR75 194 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 OTOL1A6NHN0 477 aaPredicted RBP12.03□□□□□ -0.48
CTSA-209ENST00000493522 CHURC1-FNTBB4DL54 471 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 KRT37O76014 449 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 IGLV3-25P01717 112 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 ADH5P11766 374 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 KRT3P12035 628 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 GPD1P21695 349 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 SDC4P31431 198 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 GJA4P35212 333 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 FNTBP49356 437 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 GFPT1Q06210 699 aaPredicted RBP12.03□□□□□ -0.48
CTSA-209ENST00000493522 DHCR24Q15392 516 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 CDO1Q16878 200 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 ANO4Q32M45 955 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 ZC3H12AQ5D1E8 599 aaKnown RBP12.03□□□□□ -0.48
CTSA-209ENST00000493522 LY6G5CQ5SRR4 150 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 CCDC122Q5T0U0 273 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 OTUD1Q5VV17 481 aaPredicted RBP12.03□□□□□ -0.48
CTSA-209ENST00000493522 TRNP1Q6NT89 227 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 DCUN1D2Q6PH85 259 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 TPGS1Q6ZTW0 290 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 SND1Q7KZF4 910 aaKnown RBP eCLIP12.03□□□□□ -0.489e-9■■□□□ 13.1
CTSA-209ENST00000493522 UNC45BQ8IWX7 931 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 RXFP2Q8WXD0 754 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 VCPIP1Q96JH7 1222 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 CFAP57Q96MR6 1250 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 TBCBQ99426 244 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 NPY6RQ99463 290 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 CHP1Q99653 195 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 SPHK2Q9NRA0 654 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 MYO1AQ9UBC5 1043 aa12.03□□□□□ -0.48
CTSA-209ENST00000493522 CNOT8Q9UFF9 292 aaKnown RBP12.03□□□□□ -0.48
CTSA-209ENST00000493522 GOLGA6L3A6NEY3 463 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 NEDD8-MDP1E9PL57 170 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 K7ESF4 209 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 HRO43593 1189 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 LATS1O95835 1130 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 MYBL1P10243 752 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 SLC2A3P11169 496 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 PDGFRAP16234 1089 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 TFE3P19532 575 aaPredicted RBP12.02□□□□□ -0.49
CTSA-209ENST00000493522 SLC11A2P49281 568 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 ATP11AP98196 1134 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 AMPD2Q01433 879 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 GAD2Q05329 585 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 DEUP1Q05D60 604 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 DMWDQ09019 674 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 PON2Q15165 354 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 SLC25A52Q3SY17 297 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 HEATR6Q6AI08 1181 aaKnown RBP12.02□□□□□ -0.49
CTSA-209ENST00000493522 ALKBH5Q6P6C2 394 aaKnown RBP12.02□□□□□ -0.49
CTSA-209ENST00000493522 TXNDC11Q6PKC3 985 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 Q6ZS52 159 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 CEP68Q76N32 757 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 ARCQ7LC44 396 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 CHSY1Q86X52 802 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms