RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 CASP4P49662 377 aa14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 ZNF445P59923 1031 aa14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 CXADRP78310 365 aa14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 RHDQ02161 417 aa14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 EHHADHQ08426 723 aa14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 MPPE1Q53F39 396 aa14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 ZNF776Q68DI1 518 aaPredicted RBP14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 KIAA0907Q7Z7F0 614 aaPredicted RBP14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 DENND1CQ8IV53 801 aa14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 JAKMIP2Q96AA8 810 aa14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 PLD4Q96BZ4 506 aa14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 CYFIP2Q96F07 1278 aa14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 SLC6A18Q96N87 628 aa14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 CUEDC2Q9H467 287 aa14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 PRSS16Q9NQE7 514 aa14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 STRIP2Q9ULQ0 834 aa14.9□□□□□ -0.02
PRPF40A-211ENST00000493468 EXOC3O60645 756 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 HMBSP08397 361 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 ARRB1P49407 418 aaPredicted RBP14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 UCNP55089 124 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 AMPD3Q01432 767 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 EFEMP1Q12805 493 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 ZACNQ401N2 412 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 PKDCCQ504Y2 493 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 SFMBT2Q5VUG0 894 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 ADIPOR2Q86V24 386 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 AHI1Q8N157 1196 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 ARHGAP18Q8N392 663 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 DCBLD1Q8N8Z6 715 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 PANK2Q9BZ23 570 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 CLMPQ9H6B4 373 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 GDF3Q9NR23 364 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 MARCH2Q9P0N8 246 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 TFIP11Q9UBB9 837 aaKnown RBP14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 TPX2Q9ULW0 747 aaKnown RBP14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 NCKAP1Q9Y2A7 1128 aa14.89□□□□□ -0.03
PRPF40A-211ENST00000493468 ASS1P00966 412 aaKnown RBP14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 WNT1P04628 370 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 DLDP09622 509 aaKnown RBP14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 ASIC1P78348 528 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 CCDC173Q0VFZ6 552 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 SFSWAPQ12872 951 aaKnown RBP14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 E2F4Q16254 413 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 TAF1BQ53T94 588 aaPredicted RBP14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 CHST9Q7L1S5 443 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 NELFCDQ8IXH7 590 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 OXR1Q8N573 874 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 EID2Q8N6I1 236 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 PDILTQ8N807 584 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 ZNF366Q8N895 744 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 ZNF248Q8NDW4 579 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 CYB5D2Q8WUJ1 264 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 TMEM174Q8WUU8 243 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 ELMO3Q96BJ8 720 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 TWNKQ96RR1 684 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 NT5C1AQ9BXI3 368 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 DUSP16Q9BY84 665 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 RSPH9Q9H1X1 276 aaPredicted RBP14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 PABPC3Q9H361 631 aaKnown RBP14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 ERVMER34-1Q9H9K5 563 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 SUN2Q9UH99 717 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 STOML2Q9UJZ1 356 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 CLCA2Q9UQC9 943 aa14.88□□□□□ -0.03
PRPF40A-211ENST00000493468 A0A1W2PR77 199 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 CD2BP2O95400 341 aaKnown RBP14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 LATS1O95835 1130 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 ATP5BP06576 529 aaKnown RBP14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 CKMT2P17540 419 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 GLDCP23378 1020 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 CD38P28907 300 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 RXRGP48443 463 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 GALCP54803 685 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 TMPRSS3P57727 454 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 KCNH2Q12809 1159 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 SLC39A14Q15043 492 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 TRIP4Q15650 581 aaPredicted RBP14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 GOLGA5Q8TBA6 731 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 LGMNQ99538 433 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 ABCB8Q9NUT2 735 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 ADAMTS1Q9UHI8 967 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 GGA2Q9UJY4 613 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 FZD4Q9ULV1 537 aa14.87□□□□□ -0.03
PRPF40A-211ENST00000493468 PTPN13Q12923 2485 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 SLC12A8A0AV02 714 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 VPS37CA5D8V6 355 aaPredicted RBP14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 LRRC72A6NJI9 287 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 PABPC1P11940 636 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 ACP1P24666 158 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 CCR5P51681 352 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 PCBP4P57723 403 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 NXPH1P58417 271 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 KNOP1Q1ED39 458 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 PRAMEF14Q5SWL7 426 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 MBLAC2Q68D91 279 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 NCEH1Q6PIU2 408 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 UNC13DQ70J99 1090 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 RSRC2Q7L4I2 434 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 KANSL1Q7Z3B3 1105 aa14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 ZC3H3Q8IXZ2 948 aaKnown RBP14.86□□□□□ -0.03
PRPF40A-211ENST00000493468 OR2T34Q8NGX1 318 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms