RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 DNM1Q05193 864 aaKnown RBP14.3□□□□□ -0.12
SAMM50-204ENST00000493161 MPPE1Q53F39 396 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 PRAMEF14Q5SWL7 426 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 PM20D1Q6GTS8 502 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 DHRS13Q6UX07 377 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 FAM186BQ8IYM0 893 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 ARHGAP18Q8N392 663 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 EDEM1Q92611 657 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 TATDN2Q93075 761 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 EEF2KMTQ96G04 330 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 TMEM176AQ96HP8 235 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 UBXN6Q9BZV1 441 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 TMEM8AQ9HCN3 771 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 CISHQ9NSE2 258 aa14.3□□□□□ -0.12
SAMM50-204ENST00000493161 GOLGA6L7A0A1B0GV03 622 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 CBX4O00257 560 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 MSI1O43347 362 aaKnown RBP14.29□□□□□ -0.12
SAMM50-204ENST00000493161 TNFSF14O43557 240 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 PFKFB1P16118 471 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 CD70P32970 193 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 CTSKP43235 329 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 GRIA4P48058 902 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 PDE4CQ08493 712 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 SUZ12Q15022 739 aaKnown RBP14.29□□□□□ -0.12
SAMM50-204ENST00000493161 TEAD4Q15561 434 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 SMAD1Q15797 465 aaKnown RBP14.29□□□□□ -0.12
SAMM50-204ENST00000493161 GOLGA7BQ2TAP0 167 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 ARHGAP17Q68EM7 881 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 RFWD3Q6PCD5 774 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 INTS8Q75QN2 995 aaKnown RBP14.29□□□□□ -0.12
SAMM50-204ENST00000493161 KIAA0907Q7Z7F0 614 aaPredicted RBP14.29□□□□□ -0.12
SAMM50-204ENST00000493161 ANKRD52Q8NB46 1076 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 IGSF8Q969P0 613 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 TMA16Q96EY4 203 aaKnown RBP14.29□□□□□ -0.12
SAMM50-204ENST00000493161 BTBD1Q9H0C5 482 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 OSGEPQ9NPF4 335 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 GGA2Q9UJY4 613 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 RCOR1Q9UKL0 485 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 PLA2G4CQ9UP65 541 aa14.29□□□□□ -0.12
SAMM50-204ENST00000493161 YJEFN3A6XGL0 299 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 E7ENQ6 273 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 PCDHGA12O60330 932 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 IGHV4-34P06331 123 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 PABPC1P11940 636 aaKnown RBP14.28□□□□□ -0.12
SAMM50-204ENST00000493161 KRT13P13646 458 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 CD27P26842 260 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 PSMC2P35998 433 aaKnown RBP14.28□□□□□ -0.12
SAMM50-204ENST00000493161 GRK6P43250 576 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 HARS2P49590 506 aaKnown RBP14.28□□□□□ -0.12
SAMM50-204ENST00000493161 CCT8P50990 548 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 ACACAQ13085 2346 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 NFIL3Q16649 462 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 BSPRYQ5W0U4 402 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 MBLAC2Q68D91 279 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 KRT39Q6A163 491 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 GATAD2AQ86YP4 633 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 GALNT15Q8N3T1 639 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.28□□□□□ -0.12
SAMM50-204ENST00000493161 KNL1Q8NG31 2342 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 EBF2Q9HAK2 575 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 SERGEFQ9UGK8 458 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 STOML2Q9UJZ1 356 aa14.28□□□□□ -0.12
SAMM50-204ENST00000493161 A0A087WV48 116 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 PLK4O00444 970 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 GABBR2O75899 941 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 RHOBTB3O94955 611 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 DNTTP04053 509 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 PRB1P04280 392 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 WNT1P04628 370 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 DLDP09622 509 aaKnown RBP14.27□□□□□ -0.13
SAMM50-204ENST00000493161 SLC6A4P31645 630 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 MCCD1P59942 119 aaPredicted RBP14.27□□□□□ -0.13
SAMM50-204ENST00000493161 ADIGQ0VDE8 80 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 ADAM9Q13443 819 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 E2F5Q15329 346 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 ADGRF1Q5T601 910 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 AHI1Q8N157 1196 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 PDCD7Q8N8D1 485 aaKnown RBP14.27□□□□□ -0.13
SAMM50-204ENST00000493161 CCDC150Q8NCX0 1101 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 UBA3Q8TBC4 463 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 WFIKKN2Q8TEU8 576 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 MYEOVQ96EZ4 313 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 MYO19Q96H55 970 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 SLC6A18Q96N87 628 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 DCBLD2Q96PD2 775 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 RAB20Q9NX57 234 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 TSPAN16Q9UKR8 245 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 HPSEQ9Y251 543 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 HBS1LQ9Y450 684 aaKnown RBP14.27□□□□□ -0.13
SAMM50-204ENST00000493161 PLXNA2O75051 1894 aa14.27□□□□□ -0.13
SAMM50-204ENST00000493161 URB1O60287 2271 aaKnown RBP14.26□□□□□ -0.13
SAMM50-204ENST00000493161 FAM47DPA6NHR8 397 aa14.26□□□□□ -0.13
SAMM50-204ENST00000493161 WNT9AO14904 365 aa14.26□□□□□ -0.13
SAMM50-204ENST00000493161 XPO1O14980 1071 aaKnown RBP14.26□□□□□ -0.13
SAMM50-204ENST00000493161 TBL1XO60907 577 aa14.26□□□□□ -0.13
SAMM50-204ENST00000493161 ITPKBP27987 946 aa14.26□□□□□ -0.13
SAMM50-204ENST00000493161 BCAT1P54687 386 aa14.26□□□□□ -0.13
SAMM50-204ENST00000493161 ZBTB16Q05516 673 aa14.26□□□□□ -0.13
SAMM50-204ENST00000493161 SHBQ15464 509 aa14.26□□□□□ -0.13
SAMM50-204ENST00000493161 ZCWPW2Q504Y3 356 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms