RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 PCDHGA1Q9Y5H4 931 aa11.5□□□□□ -0.57
SND1-215ENST00000492772 NYNRINQ9P2P1 1898 aaKnown RBP11.49□□□□□ -0.57
SND1-215ENST00000492772 TK2O00142 265 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 CALUO43852 315 aaPredicted RBP11.49□□□□□ -0.57
SND1-215ENST00000492772 KLRC4O43908 158 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 LATS1O95835 1130 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 HLA-FP30511 346 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 VAMP7P51809 220 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 RPS14P62263 151 aaKnown RBP11.49□□□□□ -0.57
SND1-215ENST00000492772 RACK1P63244 317 aaKnown RBP11.49□□□□□ -0.57
SND1-215ENST00000492772 C19orf57Q0VDD7 668 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 SFSWAPQ12872 951 aaKnown RBP11.49□□□□□ -0.57
SND1-215ENST00000492772 TRIP4Q15650 581 aaPredicted RBP11.49□□□□□ -0.57
SND1-215ENST00000492772 C6orf118Q5T5N4 469 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 RESP18Q5W5W9 173 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 ZNF776Q68DI1 518 aaPredicted RBP11.49□□□□□ -0.57
SND1-215ENST00000492772 LAYNQ6UX15 382 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 USP30Q70CQ3 517 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 FMNL3Q8IVF7 1028 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 ZNF557Q8N988 423 aaPredicted RBP11.49□□□□□ -0.57
SND1-215ENST00000492772 ADAM32Q8TC27 787 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 CYB5D2Q8WUJ1 264 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 SKA1Q96BD8 255 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 FAXDC2Q96IV6 333 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 HEXIM2Q96MH2 286 aaKnown RBP11.49□□□□□ -0.57
SND1-215ENST00000492772 PRSS16Q9NQE7 514 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 GGA2Q9UJY4 613 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 STOML2Q9UJZ1 356 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 SCML1Q9UN30 329 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 HBS1LQ9Y450 684 aaKnown RBP11.49□□□□□ -0.57
SND1-215ENST00000492772 GOLGA4Q13439 2230 aaKnown RBP11.49□□□□□ -0.57
SND1-215ENST00000492772 CABIN1Q9Y6J0 2220 aa11.49□□□□□ -0.57
SND1-215ENST00000492772 BPTFQ12830 3046 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 A0A1B0GTQ1 180 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 PLK4O00444 970 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 VILLO15195 856 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 YKT6O15498 198 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 RFPL3O75679 317 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 ZBED1O96006 694 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 IGHV4-34P06331 123 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 ATP5BP06576 529 aaKnown RBP11.48□□□□□ -0.57
SND1-215ENST00000492772 DLDP09622 509 aaKnown RBP11.48□□□□□ -0.57
SND1-215ENST00000492772 C1SP09871 688 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 SLFN14P0C7P3 912 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 TRIM49P0CI25 452 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 TRIM49CP0CI26 452 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 PABPC1P11940 636 aaKnown RBP11.48□□□□□ -0.57
SND1-215ENST00000492772 KRT13P13646 458 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 ME1P48163 572 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 GCLMP48507 274 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 TKTL1P51854 596 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 IL9RQ01113 521 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 NFIL3Q16649 462 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 KMT5BQ4FZB7 885 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 ZNF394Q53GI3 561 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 ARHGAP17Q68EM7 881 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 KIAA0895LQ68EN5 471 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 LRRC69Q6ZNQ3 347 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 KIAA0907Q7Z7F0 614 aaPredicted RBP11.48□□□□□ -0.57
SND1-215ENST00000492772 ADIPOR2Q86V24 386 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 PIGZQ86VD9 579 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 GRAMD1CQ8IYS0 662 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 ZNF366Q8N895 744 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 PIP4K2CQ8TBX8 421 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 RNF139Q8WU17 664 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 CRELD1Q96HD1 420 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 IRX2Q9BZI1 471 aaPredicted RBP11.48□□□□□ -0.57
SND1-215ENST00000492772 TMEM8AQ9HCN3 771 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 ABCB8Q9NUT2 735 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 SUN2Q9UH99 717 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 TRAF3IP3Q9Y228 551 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 NCKAP1Q9Y2A7 1128 aa11.48□□□□□ -0.57
SND1-215ENST00000492772 A0A1W2PPC4 97 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 KCNK3O14649 394 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 ENC1O14682 589 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 ATXN7O15265 892 aaPredicted RBP11.47□□□□□ -0.57
SND1-215ENST00000492772 MYL1P05976 194 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 PDIA4P13667 645 aaKnown RBP11.47□□□□□ -0.57
SND1-215ENST00000492772 POLR2EP19388 210 aaKnown RBP11.47□□□□□ -0.57
SND1-215ENST00000492772 ABCB4P21439 1286 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 NR2F2P24468 414 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 GTF2H1P32780 548 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 PPP3CAQ08209 521 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 KCNT1Q5JUK3 1230 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 MPP7Q5T2T1 576 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 ADGRF1Q5T601 910 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 MBLAC2Q68D91 279 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 PM20D1Q6GTS8 502 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 FAM186BQ8IYM0 893 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 ANKRD52Q8NB46 1076 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 SLC4A11Q8NBS3 891 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 LSM14AQ8ND56 463 aaKnown RBP11.47□□□□□ -0.57
SND1-215ENST00000492772 TMA16Q96EY4 203 aaKnown RBP11.47□□□□□ -0.57
SND1-215ENST00000492772 TMEM176AQ96HP8 235 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 ELF4Q99607 663 aaPredicted RBP11.47□□□□□ -0.57
SND1-215ENST00000492772 ORAI3Q9BRQ5 295 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 ULBP1Q9BZM6 244 aa11.47□□□□□ -0.57
SND1-215ENST00000492772 RSPH9Q9H1X1 276 aaPredicted RBP11.47□□□□□ -0.57
SND1-215ENST00000492772 PABPC3Q9H361 631 aaKnown RBP11.47□□□□□ -0.57
SND1-215ENST00000492772 PCDHA7Q9UN72 937 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms