RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 TXLNGQ9NUQ3 528 aa12.83□□□□□ -0.35
HMGN1-220ENST00000492280 DERAQ9Y315 318 aa12.83□□□□□ -0.35
HMGN1-220ENST00000492280 CAPN9O14815 690 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 DIAPH2O60879 1101 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 KRT37O76014 449 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 CD4P01730 458 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 DHRS4L1P0CG22 281 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 ALDH3A1P30838 453 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 ARFIP2P53365 341 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 SLC18A1P54219 525 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 RPL10AP62906 217 aaKnown RBP12.83□□□□□ -0.36
HMGN1-220ENST00000492280 DEUP1Q05D60 604 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 MAP2K5Q13163 448 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 PRKD1Q15139 912 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-220ENST00000492280 SLC25A52Q3SY17 297 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 SV2CQ496J9 727 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 PREPLQ4J6C6 727 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-220ENST00000492280 ZNF567Q8N184 647 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 TTC39CQ8N584 583 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 FAM13CQ8NE31 585 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 GSTCDQ8NEC7 633 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 FBXO27Q8NI29 283 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 GSDMBQ8TAX9 411 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 GTF3C2Q8WUA4 911 aaPredicted RBP12.83□□□□□ -0.36
HMGN1-220ENST00000492280 MOCOSQ96EN8 888 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 PCED1BQ96HM7 432 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 CELF6Q96J87 481 aaKnown RBP12.83□□□□□ -0.36
HMGN1-220ENST00000492280 OLFM3Q96PB7 478 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 PLCD4Q9BRC7 762 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 DUSP16Q9BY84 665 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 TRIM55Q9BYV6 548 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 PHACTR1Q9C0D0 580 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 NMUR2Q9GZQ4 415 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 NUDT5Q9UKK9 219 aa12.83□□□□□ -0.36
HMGN1-220ENST00000492280 C17orf102A2RUQ5 167 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 XPO1O14980 1071 aaKnown RBP12.82□□□□□ -0.36
HMGN1-220ENST00000492280 GCATO75600 419 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 AP1G2O75843 785 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 DCTN3O75935 186 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 NCAM1P13591 858 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 KCNA4P22459 653 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 PRKCHP24723 683 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 MAGEA3P43357 314 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 TAF1CQ15572 869 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-220ENST00000492280 CTC1Q2NKJ3 1217 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 SWT1Q5T5J6 900 aaKnown RBP12.82□□□□□ -0.36
HMGN1-220ENST00000492280 CMC1Q7Z7K0 106 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 ZMIZ2Q8NF64 920 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 OR52K1Q8NGK4 314 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 STK32AQ8WU08 396 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 SENP8Q96LD8 212 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 SMOQ99835 787 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 NCAPGQ9BPX3 1015 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 VPS11Q9H270 941 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 FETUBQ9UGM5 382 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 A0A0A0MRY4 1105 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 EEF2KO00418 725 aaKnown RBP12.82□□□□□ -0.36
HMGN1-220ENST00000492280 C2CD2LO14523 706 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 ANP32DO95626 131 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 POMCP01189 267 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 HUNKP57058 714 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 RCN2Q14257 317 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 HSF5Q4G112 596 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-220ENST00000492280 USP33Q8TEY7 942 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 TNIP3Q96KP6 325 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 SPATA13Q96N96 652 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 TMEM209Q96SK2 561 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 TSPYL2Q9H2G4 693 aaPredicted RBP12.82□□□□□ -0.36
HMGN1-220ENST00000492280 PPCSQ9HAB8 311 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 SSU72Q9NP77 194 aaKnown RBP12.82□□□□□ -0.36
HMGN1-220ENST00000492280 GDAP2Q9NXN4 497 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 PLLPQ9Y342 182 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 CDY2AQ9Y6F7 541 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 TPP1O14773 563 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 DGKIO75912 1065 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 ALDOAP04075 364 aaKnown RBP12.82□□□□□ -0.36
HMGN1-220ENST00000492280 DLDP09622 509 aaKnown RBP12.82□□□□□ -0.36
HMGN1-220ENST00000492280 SESN3P58005 492 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 CCDC15Q0P6D6 951 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 WASHC5Q12768 1159 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 FSCN1Q16658 493 aaKnown RBP12.82□□□□□ -0.36
HMGN1-220ENST00000492280 ATG14Q6ZNE5 492 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 PID1Q7Z2X4 250 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 NSMCE1Q8WV22 266 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 EBF4Q9BQW3 602 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 LRMDAQ9H2I8 198 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 DDIT4Q9NX09 232 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 ST3GAL5Q9UNP4 418 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 INPP5FQ9Y2H2 1132 aa12.82□□□□□ -0.36
HMGN1-220ENST00000492280 HAUS5O94927 633 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 TPH1P17752 444 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 ERCC2P18074 760 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 CTGFP29279 349 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 BRCC3P46736 316 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 SEMA5AQ13591 1074 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 MORN1Q5T089 497 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 ZDHHC17Q8IUH5 632 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 SHKBP1Q8TBC3 707 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 ARNTL2Q8WYA1 636 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 ALKBH8Q96BT7 664 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms