RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 TBC1D3IA0A087WXS9 549 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 TBC1D3EA0A087X179 549 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 TBC1D3KA0A087X1G2 549 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 WDR91A4D1P6 747 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 TBC1D3BA6NDS4 549 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 FAM90A18PA6NE21 464 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 TBC1D3FA6NER0 549 aaPredicted RBP4.43□□□□□ -1.7
VTA1-204ENST00000491881 FAM90A16PA6NEW6 464 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 FAM90A9PA6NNJ1 464 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 FAM90A5PA8MXJ8 464 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 TTC34A8MYJ7 566 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 TBC1D3LB9A6J9 549 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 POC1B-GALNT4F8VUJ3 575 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 M0QYT0 321 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 NPHP1O15259 732 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 CREB3O43889 395 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 CHRM5P08912 532 aaPredicted RBP4.43□□□□□ -1.7
VTA1-204ENST00000491881 FAM90A15PP0C7V4 464 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 FAM90A14PP0C7W9 464 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 TBC1D3HP0C7X1 549 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 SERPINA4P29622 427 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 SLC8A1P32418 973 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 ARL4CP56559 192 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 PPFIA1Q13136 1202 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 LARS2Q15031 903 aaKnown RBP4.43□□□□□ -1.7
VTA1-204ENST00000491881 TMEM119Q4V9L6 283 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 TTC22Q5TAA0 569 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 TBC1D3GQ6DHY5 549 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 TBC1D3CQ6IPX1 549 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 WDR93Q6P2C0 686 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 C16orf89Q6UX73 402 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 CERS3Q8IU89 383 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 ANKRD18AQ8IVF6 992 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 SMAP1Q8IYB5 467 aaPredicted RBP4.43□□□□□ -1.7
VTA1-204ENST00000491881 C16orf71Q8IYS4 520 aaPredicted RBP4.43□□□□□ -1.7
VTA1-204ENST00000491881 TBC1D3Q8IZP1 549 aaPredicted RBP4.43□□□□□ -1.7
VTA1-204ENST00000491881 GALNT4Q8N4A0 578 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 PNLDC1Q8NA58 520 aaKnown RBP4.43□□□□□ -1.7
VTA1-204ENST00000491881 OR6Y1Q8NGX8 325 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 ADAMTS18Q8TE60 1221 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 PPM1EQ8WY54 764 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 THAP4Q8WY91 577 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 AKAP1Q92667 903 aaKnown RBP eCLIP4.43□□□□□ -1.7
VTA1-204ENST00000491881 HIC2Q96JB3 615 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 DDX23Q9BUQ8 820 aaKnown RBP4.43□□□□□ -1.7
VTA1-204ENST00000491881 MECRQ9BV79 373 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 KCNK9Q9NPC2 374 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 ITM2CQ9NQX7 267 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 ZNF70Q9UC06 446 aaPredicted RBP4.43□□□□□ -1.7
VTA1-204ENST00000491881 SERGEFQ9UGK8 458 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 TRPC5Q9UL62 973 aaPredicted RBP4.43□□□□□ -1.7
VTA1-204ENST00000491881 MAFFQ9ULX9 164 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 ZBTB1Q9Y2K1 713 aa4.43□□□□□ -1.7
VTA1-204ENST00000491881 LOC105369274A0A096LPK9 316 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 LOC102723532A0A0G2JNH3 316 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 SLC38A8A6NNN8 435 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 TMEM232C9JQI7 657 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 H0Y3Z8 333 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 M0QZQ0 153 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 NKX2-8O15522 239 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 RNF8O76064 485 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 MBPP02686 304 aaPredicted RBP4.42□□□□□ -1.7
VTA1-204ENST00000491881 HSD3B1P14060 373 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 GRK5P34947 590 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 AARSP49588 968 aaKnown RBP eCLIP4.42□□□□□ -1.7
VTA1-204ENST00000491881 PRKAA2P54646 552 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 PROK1P58294 105 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 TAS2R50P59544 299 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 TBRG1Q3YBR2 411 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 HSP90AB4PQ58FF6 505 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 PRAMEF17Q5VTA0 474 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 FCRLBQ6BAA4 426 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
VTA1-204ENST00000491881 OR4N4Q8N0Y3 316 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 AFG1LQ8WV93 481 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 ZSCAN31Q96LW9 406 aaPredicted RBP4.42□□□□□ -1.7
VTA1-204ENST00000491881 ELOVL1Q9BW60 279 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 KRTAP1-5Q9BYS1 174 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 ARL8BQ9NVJ2 186 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 BAG5Q9UL15 447 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 RAB21Q9UL25 225 aa4.42□□□□□ -1.7
VTA1-204ENST00000491881 TCRBV5S1A1TA0A578 114 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 H3BNC9 293 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 KRT38O76015 456 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 ALDOAP04075 364 aaKnown RBP4.41□□□□□ -1.7
VTA1-204ENST00000491881 ADD2P35612 726 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 VPS41P49754 854 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 AGTR2P50052 363 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 CDK7P50613 346 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 PAPOLAP51003 745 aaKnown RBP4.41□□□□□ -1.7
VTA1-204ENST00000491881 RPL15P61313 204 aaKnown RBP4.41□□□□□ -1.7
VTA1-204ENST00000491881 RBM6P78332 1123 aaKnown RBP4.41□□□□□ -1.7
VTA1-204ENST00000491881 TLE3Q04726 772 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 CUL4BQ13620 913 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 KPNB1Q14974 876 aaKnown RBP4.41□□□□□ -1.7
VTA1-204ENST00000491881 PFKFB3Q16875 520 aaPredicted RBP4.41□□□□□ -1.7
VTA1-204ENST00000491881 TMEM95Q3KNT9 176 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 GALNTL6Q49A17 601 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 AWAT1Q58HT5 328 aa4.41□□□□□ -1.7
VTA1-204ENST00000491881 DGAT2L7PQ6IED9 249 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms