RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 GEN1Q17RS7 908 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 GOLGA7BQ2TAP0 167 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 TRIM61Q5EBN2 209 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 FIGNQ5HY92 759 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 RAB41Q5JT25 222 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 FYB2Q5VWT5 728 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 PEAR1Q5VY43 1037 aaPredicted RBP11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 LYSMD4Q5XG99 296 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 GJB7Q6PEY0 223 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 SARM1Q6SZW1 724 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 LCLAT1Q6UWP7 414 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 FAM71AQ8IYT1 594 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 CHPFQ8IZ52 775 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 KDF1Q8NAX2 398 aaPredicted RBP11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 IPO4Q8TEX9 1081 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 ZNF606Q8WXB4 792 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 KAT5Q92993 513 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 GABRG3Q99928 467 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 XPO4Q9C0E2 1151 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 TMEM9BQ9NQ34 198 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 CLEC4EQ9ULY5 219 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 IGF2RP11717 2491 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 NBEAQ8NFP9 2946 aa11.51□□□□□ -0.57
TMEM39A-211ENST00000491685 C1QTNF9BB2RNN3 333 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 RNF225M0QZC1 329 aaPredicted RBP11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 MAP3K13O43283 966 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 TOP3BO95985 862 aaKnown RBP11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 PENKP01210 267 aaPredicted RBP11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 C1QTNF9P0C862 333 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 FERP16591 822 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 SPINK2P20155 84 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 CORO1AP31146 461 aaKnown RBP11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 SOX5P35711 763 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 MAPK8P45983 427 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 PLA2G4AP47712 749 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 PSEN1P49768 467 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 ZNF252P-AS1Q0IIN9 211 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 TRIM14Q14142 442 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 UAP1L1Q3KQV9 507 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 SH3PXD2AQ5TCZ1 1133 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 ZNF677Q86XU0 584 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 SLC41A1Q8IVJ1 513 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 UBR7Q8N806 425 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 NOX5Q96PH1 765 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 XPO6Q96QU8 1125 aaKnown RBP11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 NAA15Q9BXJ9 866 aaKnown RBP11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 ULBP1Q9BZM6 244 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 GRPEL1Q9HAV7 217 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 ZNHIT6Q9NWK9 470 aaKnown RBP11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 CLIC5Q9NZA1 410 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 WDR35Q9P2L0 1181 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 EVLQ9UI08 416 aaPredicted RBP11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 FBXO10Q9UK96 956 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 PILRBQ9UKJ0 227 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 AGO1Q9UL18 857 aaKnown RBP11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 CYP8B1Q9UNU6 501 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 LUC7L2Q9Y383 392 aaKnown RBP11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 FHOD1Q9Y613 1164 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 AKAP13Q12802 2813 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 PKD1L2Q7Z442 2459 aa11.5□□□□□ -0.57
TMEM39A-211ENST00000491685 TMEM131Q92545 1883 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 A0A1W2PQJ5 194 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 TMEM8BA6NDV4 472 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 CALCAP01258 141 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 SETSIPP0DME0 302 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 RALAP11233 206 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 ENGP17813 658 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 ACADSBP45954 432 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 TKTL1P51854 596 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 BCAT1P54687 386 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 YWHAGP61981 247 aaKnown RBP eCLIP11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 RPL6Q02878 288 aaKnown RBP11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 PDE4CQ08493 712 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 BST2Q10589 180 aaKnown RBP11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 MEA1Q16626 185 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 SFMBT2Q5VUG0 894 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 SPECC1LQ69YQ0 1117 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 SDE2Q6IQ49 451 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 SYT12Q8IV01 421 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 DENND1CQ8IV53 801 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 DRC7Q8IY82 874 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 ZNF276Q8N554 614 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 MSANTD4Q8NCY6 345 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 DEFB124Q8NES8 71 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 OR2I1PQ8NGU4 316 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 CPLX3Q8WVH0 158 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 MRGPRX1Q96LB2 322 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 MIS12Q9H081 205 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 LRRC4Q9HBW1 653 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 TSPAN16Q9UKR8 245 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 WASF3Q9UPY6 502 aa11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 BZW2Q9Y6E2 419 aaKnown RBP11.49□□□□□ -0.57
TMEM39A-211ENST00000491685 DSPP15924 2871 aaKnown RBP11.48□□□□□ -0.57
TMEM39A-211ENST00000491685 SLC12A8A0AV02 714 aa11.48□□□□□ -0.57
TMEM39A-211ENST00000491685 GOLGA6L6A8MZA4 724 aa11.48□□□□□ -0.57
TMEM39A-211ENST00000491685 F8VZ95 297 aa11.48□□□□□ -0.57
TMEM39A-211ENST00000491685 XPO1O14980 1071 aaKnown RBP11.48□□□□□ -0.57
TMEM39A-211ENST00000491685 GABBR2O75899 941 aa11.48□□□□□ -0.57
TMEM39A-211ENST00000491685 GFPT2O94808 682 aa11.48□□□□□ -0.57
TMEM39A-211ENST00000491685 CFIP05156 583 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms