RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 KREMEN1Q96MU8 473 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 MIS12Q9H081 205 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 ITM2CQ9NQX7 267 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 WSB2Q9NYS7 404 aaPredicted RBP14.21□□□□□ -0.13
COL6A3-211ENST00000491233 TP53BP1Q12888 1972 aaPredicted RBP14.2□□□□□ -0.14
COL6A3-211ENST00000491233 OPHN1O60890 802 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 GNA14O95837 355 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 TOP3BO95985 862 aaKnown RBP14.2□□□□□ -0.14
COL6A3-211ENST00000491233 AFPP02771 609 aaKnown RBP14.2□□□□□ -0.14
COL6A3-211ENST00000491233 SYPP08247 313 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 PABPC1P11940 636 aaKnown RBP14.2□□□□□ -0.14
COL6A3-211ENST00000491233 SPINK2P20155 84 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 SLC6A4P31645 630 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 TBX4P57082 545 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 FNDC3BQ53EP0 1204 aaKnown RBP14.2□□□□□ -0.14
COL6A3-211ENST00000491233 NUGGCQ68CJ6 796 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 RFWD3Q6PCD5 774 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 PIP4P1Q86T03 277 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 AHI1Q8N157 1196 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 ZCCHC9Q8N567 271 aaKnown RBP14.2□□□□□ -0.14
COL6A3-211ENST00000491233 ZNF366Q8N895 744 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL6A3-211ENST00000491233 EHBP1Q8NDI1 1231 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 WFDC5Q8TCV5 224 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 HSFY1Q96LI6 401 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 INTS2Q9H0H0 1204 aaKnown RBP14.2□□□□□ -0.14
COL6A3-211ENST00000491233 ABCB8Q9NUT2 735 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 GGA2Q9UJY4 613 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 WASF3Q9UPY6 502 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL6A3-211ENST00000491233 CACNA1EQ15878 2313 aa14.2□□□□□ -0.14
COL6A3-211ENST00000491233 GOLGA6L7A0A1B0GV03 622 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 SPAARA0A1B0GVQ0 90 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 UPK3BL1B0FP48 263 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 UPK3BL2E5RIL1 263 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 TIMM44O43615 452 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 ACSL4O60488 711 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 TBL1XO60907 577 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 FBXO21O94952 628 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 IGLV3-19P01714 112 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 ACADMP11310 421 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 KRT5P13647 590 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 GNSP15586 552 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 OXTRP30559 389 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 SLC11A2P49281 568 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 MARSP56192 900 aaKnown RBP14.19□□□□□ -0.14
COL6A3-211ENST00000491233 RING1Q06587 406 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 GRIK2Q13002 908 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 CAMK2GQ13555 558 aaPredicted RBP14.19□□□□□ -0.14
COL6A3-211ENST00000491233 NUMA1Q14980 2115 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 FAM133BQ5BKY9 247 aaKnown RBP14.19□□□□□ -0.14
COL6A3-211ENST00000491233 PIK3R6Q5UE93 754 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 ADIPOR2Q86V24 386 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 UNC45BQ8IWX7 931 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 OR2T3Q8NH03 318 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 DQX1Q8TE96 717 aaKnown RBP14.19□□□□□ -0.14
COL6A3-211ENST00000491233 PRICKLE1Q96MT3 831 aaPredicted RBP14.19□□□□□ -0.14
COL6A3-211ENST00000491233 SRRTQ9BXP5 876 aaKnown RBP14.19□□□□□ -0.14
COL6A3-211ENST00000491233 LHX5Q9H2C1 402 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 TMEM245Q9H330 911 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 ST7Q9NRC1 585 aa14.19□□□□□ -0.14
COL6A3-211ENST00000491233 TMEM131Q92545 1883 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 PCNX2A6NKB5 2137 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 USP24Q9UPU5 2620 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 A0A1B0GTW7 788 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 C1QTNF9BB2RNN3 333 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 FYNP06241 537 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 C1QTNF9P0C862 333 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 CD70P32970 193 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 SIM1P81133 766 aaPredicted RBP14.18□□□□□ -0.14
COL6A3-211ENST00000491233 PTPRNQ16849 979 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 DCAF12L1Q5VU92 463 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 MBLAC2Q68D91 279 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 NADSYN1Q6IA69 706 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 DENND1BQ6P3S1 775 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 UNQ6494/PRO21346Q6UXR6 183 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 KIAA0907Q7Z7F0 614 aaPredicted RBP14.18□□□□□ -0.14
COL6A3-211ENST00000491233 FAM124AQ86V42 546 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 HJURPQ8NCD3 748 aaPredicted RBP14.18□□□□□ -0.14
COL6A3-211ENST00000491233 CADM4Q8NFZ8 388 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 DNASE2BQ8WZ79 361 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 FAM149B1Q96BN6 582 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 FCRL2Q96LA5 508 aaPredicted RBP14.18□□□□□ -0.14
COL6A3-211ENST00000491233 SERPINB11Q96P15 392 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 ADAM33Q9BZ11 813 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 MIR1-1HGQ9H1L0 117 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 DNAAF2Q9NVR5 837 aaKnown RBP14.18□□□□□ -0.14
COL6A3-211ENST00000491233 STIM2Q9P246 746 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 CNTN6Q9UQ52 1028 aa14.18□□□□□ -0.14
COL6A3-211ENST00000491233 IRAK2O43187 625 aa14.17□□□□□ -0.14
COL6A3-211ENST00000491233 SART1O43290 800 aaKnown RBP14.17□□□□□ -0.14
COL6A3-211ENST00000491233 GJB3O75712 270 aa14.17□□□□□ -0.14
COL6A3-211ENST00000491233 PROS1P07225 676 aa14.17□□□□□ -0.14
COL6A3-211ENST00000491233 CD59P13987 128 aa14.17□□□□□ -0.14
COL6A3-211ENST00000491233 GPD2P43304 727 aa14.17□□□□□ -0.14
COL6A3-211ENST00000491233 MPP7Q5T2T1 576 aa14.17□□□□□ -0.14
COL6A3-211ENST00000491233 TAC4Q86UU9 113 aa14.17□□□□□ -0.14
COL6A3-211ENST00000491233 MFN1Q8IWA4 741 aa14.17□□□□□ -0.14
COL6A3-211ENST00000491233 ZNF557Q8N988 423 aaPredicted RBP14.17□□□□□ -0.14
COL6A3-211ENST00000491233 ADAM32Q8TC27 787 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms