RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 EFCAB13Q8IY85 973 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 IQCKQ8N0W5 287 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 ZNF444Q8N0Y2 327 aaPredicted RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 ADSSL1Q8N142 457 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CFAP52Q8N1V2 620 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SLC35F6Q8N357 371 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CPA6Q8N4T0 437 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 AFAP1L2Q8N4X5 818 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 MAGEB6Q8N7X4 407 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 VGLL2Q8N8G2 317 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 C4orf32Q8N8J7 132 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 TRIM58Q8NG06 486 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 OR2I1PQ8NGU4 316 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SMG7Q92540 1137 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SYN2Q92777 582 aaPredicted RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 KAT5Q92993 513 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 DHX58Q96C10 678 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 EPSTI1Q96J88 318 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CCDC42Q96M95 316 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 UROC1Q96N76 676 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 AIFM3Q96NN9 605 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 ERGIC2Q96RQ1 377 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CHP1Q99653 195 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SMAD5Q99717 465 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 UBAC1Q9BSL1 405 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CRACR2AQ9BSW2 395 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SELENOOQ9BVL4 669 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 BRIP1Q9BX63 1249 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 TSGA10Q9BZW7 698 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 YY1AP1Q9H869 796 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 MAGEF1Q9HAY2 307 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 ZNF287Q9HBT7 754 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 PDE11AQ9HCR9 933 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 RIC8AQ9NPQ8 531 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 NRIP3Q9NQ35 241 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SEMA4GQ9NTN9 838 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 ABHD10Q9NUJ1 306 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 TCP11L1Q9NUJ3 509 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 TMEM74BQ9NUR3 256 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 TMOD3Q9NYL9 352 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 SH3BP4Q9P0V3 963 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 VPS18Q9P253 973 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 DKK2Q9UBU2 259 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 RSPH14Q9UHP6 348 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 GUCA1BQ9UMX6 200 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 KCNJ14Q9UNX9 436 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 PRKAB1Q9Y478 270 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 PCDHA3Q9Y5H8 950 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 RAD54BQ9Y620 910 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 BZW2Q9Y6E2 419 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 MED1Q15648 1581 aaPredicted RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 NWD2Q9ULI1 1742 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CCDC88AQ3V6T2 1871 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 CPDO75976 1380 aa2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 BAZ2BQ9UIF8 2168 aaKnown RBP2.22□□□□□ -2.05
SNRNP40-207ENST00000491106 NEDD4P46934 1319 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 SPATA31A3Q5VYP0 1347 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 UBN2Q6ZU65 1347 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 PCDH11XQ9BZA7 1347 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 PCDH11YQ9BZA8 1340 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 MRC1P22897 1456 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 ARFGEF2Q9Y6D5 1785 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 MYH7BA7E2Y1 1941 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 MYH1P12882 1939 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 MYH4Q9Y623 1939 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 TTC26A0AVF1 554 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 LINC00473A8K010 186 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 KCNJ18B7U540 433 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 H3BUI4 141 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 CES2O00748 559 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 PSMA7O14818 248 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 RANBP6O60518 1105 aaKnown RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 MATN4O95460 622 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 IL33O95760 270 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 ERBB2P04626 1255 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 GYPCP04921 128 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 HNRNPCP07910 306 aaKnown RBP eCLIP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 GJB1P08034 283 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 C4AP0C0L4 1744 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 C4BP0C0L5 1744 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 RHOXF2BP0C7M4 288 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 CYP2D6P10635 497 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 CYP19A1P11511 503 aaPredicted RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 SCG2P13521 617 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 PPP3CBP16298 524 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 GNA11P29992 359 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 ARHGAP25P42331 645 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 TDO2P48775 406 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 LMAN1P49257 510 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 MTNR1BP49286 362 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 FXR1P51114 621 aaKnown RBP eCLIP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 ZNF81P51508 661 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 GTF2A1P52655 376 aaPredicted RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 ZNF135P52742 658 aaPredicted RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 MAPK10P53779 464 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 DRG2P55039 364 aaKnown RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 STX17P56962 302 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 NXPH1P58417 271 aa2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 RPS8P62241 208 aaKnown RBP2.21□□□□□ -2.06
SNRNP40-207ENST00000491106 DRP2Q13474 957 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms