RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 RAB44Q7Z6P3 723 aaPredicted RBP18.53■□□□□ 0.56
YIPF3-208ENST00000490447 RBBP8NLQ8NC74 664 aaPredicted RBP18.53■□□□□ 0.56
YIPF3-208ENST00000490447 SETD7Q8WTS6 366 aaKnown RBP18.53■□□□□ 0.56
YIPF3-208ENST00000490447 CYB5D2Q8WUJ1 264 aa18.53■□□□□ 0.56
YIPF3-208ENST00000490447 GTPBP4Q9BZE4 634 aaKnown RBP18.53■□□□□ 0.56
YIPF3-208ENST00000490447 PCED1AQ9H1Q7 454 aa18.53■□□□□ 0.56
YIPF3-208ENST00000490447 STOML2Q9UJZ1 356 aa18.53■□□□□ 0.56
YIPF3-208ENST00000490447 APOBEC2Q9Y235 224 aaKnown RBP18.53■□□□□ 0.56
YIPF3-208ENST00000490447 CACNA1EQ15878 2313 aa18.53■□□□□ 0.56
YIPF3-208ENST00000490447 FREM2Q5SZK8 3169 aa18.53■□□□□ 0.56
YIPF3-208ENST00000490447 O00370 1275 aa18.52■□□□□ 0.56
YIPF3-208ENST00000490447 MSI1O43347 362 aaKnown RBP18.52■□□□□ 0.56
YIPF3-208ENST00000490447 DNTTP04053 509 aa18.52■□□□□ 0.56
YIPF3-208ENST00000490447 ATP5BP06576 529 aaKnown RBP18.52■□□□□ 0.56
YIPF3-208ENST00000490447 DAOAP59103 153 aa18.52■□□□□ 0.56
YIPF3-208ENST00000490447 CAMK2GQ13555 558 aaPredicted RBP18.52■□□□□ 0.56
YIPF3-208ENST00000490447 STIM1Q13586 685 aa18.52■□□□□ 0.56
YIPF3-208ENST00000490447 ANKRD40Q6AI12 368 aa18.52■□□□□ 0.56
YIPF3-208ENST00000490447 TMEM270Q6UE05 265 aa18.52■□□□□ 0.56
YIPF3-208ENST00000490447 UNC45BQ8IWX7 931 aa18.52■□□□□ 0.56
YIPF3-208ENST00000490447 SCML4Q8N228 414 aa18.52■□□□□ 0.56
YIPF3-208ENST00000490447 ZNF557Q8N988 423 aaPredicted RBP18.52■□□□□ 0.56
YIPF3-208ENST00000490447 SMARCE1Q969G3 411 aa18.52■□□□□ 0.56
YIPF3-208ENST00000490447 FBRSQ9HAH7 460 aa18.52■□□□□ 0.56
YIPF3-208ENST00000490447 METTL14Q9HCE5 456 aaKnown RBP18.52■□□□□ 0.56
YIPF3-208ENST00000490447 TM7SF3Q9NS93 570 aa18.52■□□□□ 0.56
YIPF3-208ENST00000490447 HOOK1Q9UJC3 728 aaKnown RBP18.52■□□□□ 0.56
YIPF3-208ENST00000490447 TYW5A2RUC4 315 aaKnown RBP18.51■□□□□ 0.55
YIPF3-208ENST00000490447 FAM221BA6H8Z2 402 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 TRIM49BA6NDI0 452 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 PAEPP09466 180 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 PABPC1P11940 636 aaKnown RBP18.51■□□□□ 0.55
YIPF3-208ENST00000490447 SLC11A2P49281 568 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 RGS7P49802 495 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 AFF3P51826 1226 aaKnown RBP18.51■□□□□ 0.55
YIPF3-208ENST00000490447 CETN1Q12798 172 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 TTC31Q49AM3 519 aaPredicted RBP18.51■□□□□ 0.55
YIPF3-208ENST00000490447 NUGGCQ68CJ6 796 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 ZC3H3Q8IXZ2 948 aaKnown RBP18.51■□□□□ 0.55
YIPF3-208ENST00000490447 FMR1NBQ8N0W7 255 aaPredicted RBP18.51■□□□□ 0.55
YIPF3-208ENST00000490447 ZNF366Q8N895 744 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 ADAMTS14Q8WXS8 1223 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 SLC35C1Q96A29 364 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 NT5C1BQ96P26 610 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 BTBD1Q9H0C5 482 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 TMEM245Q9H330 911 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 PCOLCE2Q9UKZ9 415 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 PCDHB4Q9Y5E5 795 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 PCNX2A6NKB5 2137 aa18.51■□□□□ 0.55
YIPF3-208ENST00000490447 M0QYV0 167 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 PIK3R2O00459 728 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 PSMA7O14818 248 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 IRAK2O43187 625 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 TBL1XO60907 577 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 DLDP09622 509 aaKnown RBP18.5■□□□□ 0.55
YIPF3-208ENST00000490447 ZNF883P0CG24 379 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 POLR2EP19388 210 aaKnown RBP18.5■□□□□ 0.55
YIPF3-208ENST00000490447 PMS1P54277 932 aaKnown RBP18.5■□□□□ 0.55
YIPF3-208ENST00000490447 ZBTB16Q05516 673 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 STILQ15468 1287 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 TEAD4Q15561 434 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 HLA-BQ31612 363 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 MBLAC2Q68D91 279 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 LCLAT1Q6UWP7 414 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 PPM1KQ8N3J5 372 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.5■□□□□ 0.55
YIPF3-208ENST00000490447 PNPLA1Q8N8W4 532 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 IRGQQ8WZA9 623 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 IL21RQ9HBE5 538 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 DMXL2Q8TDJ6 3036 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 FAM208BQ5VWN6 2430 aa18.5■□□□□ 0.55
YIPF3-208ENST00000490447 A0A1B0GVT2 93 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 ACSL1P33121 698 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 FMO5P49326 533 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 ST8SIA6P61647 398 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 SUZ12Q15022 739 aaKnown RBP18.49■□□□□ 0.55
YIPF3-208ENST00000490447 CCDC40Q4G0X9 1142 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 PKDCCQ504Y2 493 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 MPP7Q5T2T1 576 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 MSANTD2Q6P1R3 559 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 RFWD3Q6PCD5 774 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 ADIPOR2Q86V24 386 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 MFN1Q8IWA4 741 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 CCDC117Q8IWD4 279 aaPredicted RBP18.49■□□□□ 0.55
YIPF3-208ENST00000490447 UBR7Q8N806 425 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 DDX50Q9BQ39 737 aaKnown RBP18.49■□□□□ 0.55
YIPF3-208ENST00000490447 IRX2Q9BZI1 471 aaPredicted RBP18.49■□□□□ 0.55
YIPF3-208ENST00000490447 C6orf106Q9H6K1 298 aaPredicted RBP18.49■□□□□ 0.55
YIPF3-208ENST00000490447 SUN2Q9UH99 717 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.49■□□□□ 0.55
YIPF3-208ENST00000490447 LAMA5O15230 3695 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 FLRT2O43155 660 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 SEMA4FO95754 770 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 LTFP02788 710 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 CSNK1EP49674 416 aaKnown RBP18.49■□□□□ 0.55
YIPF3-208ENST00000490447 SGSHP51688 502 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 TBX4P57082 545 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 PTPRNQ16849 979 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 PIK3R6Q5UE93 754 aa18.49■□□□□ 0.55
YIPF3-208ENST00000490447 PMF1Q6P1K2 205 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms