RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 NAA35Q5VZE5 725 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 RAP1GAP2Q684P5 730 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 LAIR1Q6GTX8 287 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 TRNP1Q6NT89 227 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 SLC26A9Q7LBE3 791 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 PHLDB2Q86SQ0 1253 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 XYLT1Q86Y38 959 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 CFAP52Q8N1V2 620 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 ANKRD20A12PQ8NF67 263 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 OLIG1Q8TAK6 271 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 KCNV2Q8TDN2 545 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 HMGB4Q8WW32 186 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 RLN3Q8WXF3 142 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 LMLNQ96KR4 655 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 NAP1L5Q96NT1 182 aaPredicted RBP18.82■□□□□ 0.6
COL9A3-214ENST00000490398 GABRG3Q99928 467 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 NAT10Q9H0A0 1025 aaKnown RBP18.82■□□□□ 0.6
COL9A3-214ENST00000490398 DUSP15Q9H1R2 295 aaPredicted RBP18.82■□□□□ 0.6
COL9A3-214ENST00000490398 SYNCQ9H7C4 482 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 FAM204AQ9H8W3 233 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 RTN4Q9NQC3 1192 aaKnown RBP18.82■□□□□ 0.6
COL9A3-214ENST00000490398 STIM2Q9P246 746 aa18.82■□□□□ 0.6
COL9A3-214ENST00000490398 DAB1O75553 588 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 GABRG2P18507 467 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 CD70P32970 193 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 IL12RB1P42701 662 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 CDR2Q01850 454 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 SPEM2Q0P670 501 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 PLK5Q496M5 336 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 MS4A13Q5J8X5 152 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 NUDT18Q6ZVK8 323 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 ANKS1BQ7Z6G8 1248 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 ERICH1Q86X53 443 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 ZNF397Q8NF99 534 aaPredicted RBP18.81■□□□□ 0.6
COL9A3-214ENST00000490398 IPO4Q8TEX9 1081 aaKnown RBP18.81■□□□□ 0.6
COL9A3-214ENST00000490398 C18orf8Q96DM3 657 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 SPAG5Q96R06 1193 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 SLC2A11Q9BYW1 496 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 CBX8Q9HC52 389 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 ANLNQ9NQW6 1124 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 ABCB8Q9NUT2 735 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 DDIT4Q9NX09 232 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 ELOVL2Q9NXB9 296 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 RAB23Q9ULC3 237 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 CEP83Q9Y592 693 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 STON1Q9Y6Q2 735 aa18.81■□□□□ 0.6
COL9A3-214ENST00000490398 LAMA1P25391 3075 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 SMTNL1A8MU46 457 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 KCNU1A8MYU2 1149 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 GOLGA8SH3BPF8 625 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 I6L893 689 aaPredicted RBP18.8■□□□□ 0.6
COL9A3-214ENST00000490398 CYP1A1P04798 512 aaPredicted RBP18.8■□□□□ 0.6
COL9A3-214ENST00000490398 GGCXP38435 758 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 STAT1P42224 750 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 ATXN1P54253 815 aaKnown RBP18.8■□□□□ 0.6
COL9A3-214ENST00000490398 CDK17Q00537 523 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 ARID5AQ03989 594 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 CCDC6Q16204 474 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 FSCBQ5H9T9 825 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 MMS22LQ6ZRQ5 1243 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 CACNA2D4Q7Z3S7 1137 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 TRMT11Q7Z4G4 463 aaKnown RBP18.8■□□□□ 0.6
COL9A3-214ENST00000490398 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.8■□□□□ 0.6
COL9A3-214ENST00000490398 KIAA0907Q7Z7F0 614 aaPredicted RBP18.8■□□□□ 0.6
COL9A3-214ENST00000490398 SLC30A5Q8TAD4 765 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 CYB5D2Q8WUJ1 264 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 TRIM62Q9BVG3 475 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 CIPCQ9C0C6 399 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 POLMQ9NP87 494 aaPredicted RBP18.8■□□□□ 0.6
COL9A3-214ENST00000490398 CD93Q9NPY3 652 aa18.8■□□□□ 0.6
COL9A3-214ENST00000490398 THAP10Q9P2Z0 257 aaPredicted RBP18.8■□□□□ 0.6
COL9A3-214ENST00000490398 MYO18AQ92614 2054 aaKnown RBP18.8■□□□□ 0.6
COL9A3-214ENST00000490398 GJB6O95452 261 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 LSM8O95777 96 aaKnown RBP18.79■□□□□ 0.6
COL9A3-214ENST00000490398 RETP07949 1114 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 TACR2P21452 398 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 FLT3P36888 993 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 IRAK1P51617 712 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 NME3Q13232 169 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 ZNF234Q14588 700 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 MAP7D1Q3KQU3 841 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 FAM102AQ5T9C2 384 aaPredicted RBP18.79■□□□□ 0.6
COL9A3-214ENST00000490398 ADIPOR2Q86V24 386 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 LUZP1Q86V48 1076 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 CIR1Q86X95 450 aaPredicted RBP18.79■□□□□ 0.6
COL9A3-214ENST00000490398 LGI2Q8N0V4 545 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.79■□□□□ 0.6
COL9A3-214ENST00000490398 NPY6RQ99463 290 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 PRMT1Q99873 361 aaKnown RBP18.79■□□□□ 0.6
COL9A3-214ENST00000490398 BCCIPQ9P287 314 aaKnown RBP eCLIP18.79■□□□□ 0.6
COL9A3-214ENST00000490398 MBD1Q9UIS9 605 aaPredicted RBP18.79■□□□□ 0.6
COL9A3-214ENST00000490398 GGA2Q9UJY4 613 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 GMEB2Q9UKD1 530 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 SNX10Q9Y5X0 201 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 SPTBN4Q9H254 2564 aa18.79■□□□□ 0.6
COL9A3-214ENST00000490398 M0QYT0 321 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 APOEP02649 317 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 NDUFV2P19404 249 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 PRKCHP24723 683 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 NOS2P35228 1153 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms