RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	NAALADL1	Q9UQQ1	740 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	ASB3	Q9Y575	518 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	PCDHGA2	Q9Y5H1	932 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101		A0A1W2PQH9	124 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	CAPN9	O14815	690 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	ZDHHC11B	P0C7U3	371 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	GABRR2	P28476	465 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	ATP11A	P98196	1134 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	FOXK2	Q01167	660 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	DNAH14	Q0VDD8	3507 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	TAF10	Q12962	218 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	HADH	Q16836	314 aa	Known RBP	18.87	■□□□□ 0.61
SRM-206	ENST00000490101	GPR158	Q5T848	1215 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	SH3PXD2A	Q5TCZ1	1133 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	BTBD8	Q5XKL5	378 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	GAREM2	Q75VX8	874 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	POLN	Q7Z5Q5	900 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	FAM172A	Q8WUF8	416 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	OVCA2	Q8WZ82	227 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	ALG3	Q92685	438 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	PSMG2	Q969U7	264 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	E2F7	Q96AV8	911 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	PGAP3	Q96FM1	320 aa	Predicted RBP	18.87	■□□□□ 0.61
SRM-206	ENST00000490101	TRMT2B	Q96GJ1	504 aa	Known RBP	18.87	■□□□□ 0.61
SRM-206	ENST00000490101	TBCB	Q99426	244 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	CARD9	Q9H257	536 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	L2HGDH	Q9H9P8	463 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	LMAN1L	Q9HAT1	526 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	NMUR1	Q9HB89	426 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	ZSCAN32	Q9NX65	697 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	CLIC5	Q9NZA1	410 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	GMIP	Q9P107	970 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	NCDN	Q9UBB6	729 aa		18.87	■□□□□ 0.61
SRM-206	ENST00000490101	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	18.87	■□□□□ 0.61
SRM-206	ENST00000490101	ZNF638	Q14966	1978 aa	Known RBP	18.86	■□□□□ 0.61
SRM-206	ENST00000490101	KCNK3	O14649	394 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	NCAM1	P13591	858 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	TFE3	P19532	575 aa	Predicted RBP	18.86	■□□□□ 0.61
SRM-206	ENST00000490101	MIP	P30301	263 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	MARCKSL1	P49006	195 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	PGF	P49763	221 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	SULT1E1	P49888	294 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	HDAC4	P56524	1084 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	RWDD2B	P57060	319 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	ARHGAP15	Q53QZ3	475 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	OTUD1	Q5VV17	481 aa	Predicted RBP	18.86	■□□□□ 0.61
SRM-206	ENST00000490101	DAB2IP	Q5VWQ8	1189 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	ITIH5	Q86UX2	942 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	ARID3B	Q8IVW6	561 aa	Predicted RBP	18.86	■□□□□ 0.61
SRM-206	ENST00000490101	KATNAL2	Q8IYT4	538 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	ZNF687	Q8N1G0	1237 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	PDZD8	Q8NEN9	1154 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	TTC8	Q8TAM2	541 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	EDEM1	Q92611	657 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	RMDN1	Q96DB5	314 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	SLITRK1	Q96PX8	696 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	ADAM33	Q9BZ11	813 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	CHRD	Q9H2X0	955 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	TRPV5	Q9NQA5	729 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	PRMT8	Q9NR22	394 aa	Predicted RBP	18.86	■□□□□ 0.61
SRM-206	ENST00000490101	TLR8	Q9NR97	1041 aa	Known RBP	18.86	■□□□□ 0.61
SRM-206	ENST00000490101	TMEM51	Q9NW97	253 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	MRFAP1	Q9Y605	127 aa		18.86	■□□□□ 0.61
SRM-206	ENST00000490101	TRUB2	O95900	331 aa	Known RBP	18.85	■□□□□ 0.61
SRM-206	ENST00000490101	KRT7	P08729	469 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	TCF4	P15884	667 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	SSR1	P43307	286 aa	Known RBP	18.85	■□□□□ 0.61
SRM-206	ENST00000490101	SOX9	P48436	509 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	DNA2	P51530	1060 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	KPNA1	P52294	538 aa	Predicted RBP	18.85	■□□□□ 0.61
SRM-206	ENST00000490101	CYP4F8	P98187	520 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	SLC25A11	Q02978	314 aa	Known RBP	18.85	■□□□□ 0.61
SRM-206	ENST00000490101	TAF12	Q16514	161 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	CDO1	Q16878	200 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	SNX30	Q5VWJ9	437 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	MSANTD2	Q6P1R3	559 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	ZNF276	Q8N554	614 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	ZBTB44	Q8NCP5	570 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	COG1	Q8WTW3	980 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	ZFYVE19	Q96K21	471 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	PSMB7	Q99436	277 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	OSER1	Q9NX31	292 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	DDX56	Q9NY93	547 aa	Known RBP	18.85	■□□□□ 0.61
SRM-206	ENST00000490101	RNF14	Q9UBS8	474 aa		18.85	■□□□□ 0.61
SRM-206	ENST00000490101	MYO16	Q9Y6X6	1858 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101		M0QYT0	321 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	ARNTL	O00327	626 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	PRPSAP2	O60256	369 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	SRGAP2	O75044	1071 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	FGF19	O95750	216 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	F9	P00740	461 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	IGLV3-25	P01717	112 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	IL1R2	P27930	398 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	CXCR5	P32302	372 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	PITX1	P78337	314 aa	Predicted RBP	18.84	■□□□□ 0.61
SRM-206	ENST00000490101	WHAMMP3	Q1A5X7	153 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	RAB6C	Q53S08	254 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	BOLA3	Q53S33	107 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	DCAF12L1	Q5VU92	463 aa		18.84	■□□□□ 0.61
SRM-206	ENST00000490101	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	18.84	■□□□□ 0.61

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