RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 IRAK2O43187 625 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 AP5Z1O43299 807 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 MSI1O43347 362 aaKnown RBP10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 ERCC5P28715 1186 aaPredicted RBP10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 SLC6A4P31645 630 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 DHPSP49366 369 aaPredicted RBP10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 CAMK2GQ13555 558 aaPredicted RBP10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 ZNF234Q14588 700 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 PTPRNQ16849 979 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 SYPL2Q5VXT5 272 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 NUGGCQ68CJ6 796 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 IL31Q6EBC2 164 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 NADSYN1Q6IA69 706 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 GJB7Q6PEY0 223 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 GBP6Q6ZN66 633 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 SLC41A1Q8IVJ1 513 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 PGBD3Q8N328 593 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 DQX1Q8TE96 717 aaKnown RBP10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 WFIKKN2Q8TEU8 576 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 UCMAQ8WVF2 138 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 DNASE2BQ8WZ79 361 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 PIGKQ92643 395 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 CRACR2AQ9BSW2 395 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 EDEM2Q9BV94 578 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 LHX5Q9H2C1 402 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 CLSTN2Q9H4D0 955 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 THAP9Q9H5L6 903 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 CAPN10Q9HC96 672 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 ACP6Q9NPH0 428 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 BCCIPQ9P287 314 aaKnown RBP eCLIP10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 APEX2Q9UBZ4 518 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 TLR6Q9Y2C9 796 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 NFE2L3Q9Y4A8 694 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 RAD54BQ9Y620 910 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 KNL1Q8NG31 2342 aa10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 CKAP5Q14008 2032 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 CHD8Q9HCK8 2581 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 C4orf47A7E2U8 309 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 UPK3BL1B0FP48 263 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 UPK3BL2E5RIL1 263 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 PIK3R2O00459 728 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 ZBTB24O43167 697 aaPredicted RBP10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 MED7O43513 233 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 ACSL4O60488 711 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 LETM1O95202 739 aaPredicted RBP10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 KCNK5O95279 499 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 GLI1P08151 1106 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 PRKCSHP14314 528 aaPredicted RBP10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 HOXB1P14653 301 aaPredicted RBP10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 CSRP1P21291 193 aaKnown RBP10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 ITPKAP23677 461 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 PRKCHP24723 683 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 PMLP29590 882 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 SLC11A2P49281 568 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 SGSHP51688 502 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 COPAP53621 1224 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 TBX4P57082 545 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 SHC2P98077 582 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 APBA1Q02410 837 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 ZNF33AQ06730 810 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 LMAN2Q12907 356 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 ARID5BQ14865 1188 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 EXOC3L4Q17RC7 722 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 CT47A1Q5JQC4 288 aaPredicted RBP10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 N4BP2L1Q5TBK1 243 aaPredicted RBP10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 LYSMD4Q5XG99 296 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 TMPRSS6Q8IU80 811 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 CADM4Q8NFZ8 388 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 FIBINQ8TAL6 211 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 CEP76Q8TAP6 659 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 SORCS1Q8WY21 1168 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 TTC17Q96AE7 1141 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 MYEOVQ96EZ4 313 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 TRIM62Q9BVG3 475 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 MIS12Q9H081 205 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 SLC6A17Q9H1V8 727 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 WSB2Q9NYS7 404 aaPredicted RBP10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 PCDHGC3Q9UN70 934 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 NAALADL1Q9UQQ1 740 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 LAMA1P25391 3075 aa10.11□□□□□ -0.79
TMEM39A-210ENST00000490099 GOLGA6L7A0A1B0GV03 622 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 KCNU1A8MYU2 1149 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 KCNJ18B7U540 433 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 C10orf142B7Z368 130 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 TSPAN3O60637 253 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 SERPINF2P08697 491 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 DLDP09622 509 aaKnown RBP10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 KRT5P13647 590 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 CD6P30203 668 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 TPMTP51580 245 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 YWHAZP63104 245 aaKnown RBP10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 RPL6Q02878 288 aaKnown RBP10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 PDCLQ13371 301 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 STARD3Q14849 445 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 DUOXA1Q1HG43 343 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 DPCR1Q3MIW9 517 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 TRIM61Q5EBN2 209 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 ARSIQ5FYB1 569 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 MS4A13Q5J8X5 152 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 MIIPQ5JXC2 388 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms